Protein–RNA interactions for Protein: P36534

MRPL40, 54S ribosomal protein L40, mitochondrial, yeastyeast

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL40P36534 RAD34YDR314C 2079 nt0.73□□□□□ -2.29
MRPL40P36534 ECL1YGR146C 636 nt0.72□□□□□ -2.29
MRPL40P36534 YGR290WYGR290W 444 nt0.72□□□□□ -2.29
MRPL40P36534 YIR044CYIR044C 186 nt0.72□□□□□ -2.29
MRPL40P36534 YLR171WYLR171W 390 nt0.72□□□□□ -2.29
MRPL40P36534 YOR282WYOR282W 321 nt0.72□□□□□ -2.29
MRPL40P36534 YPL229WYPL229W 621 nt0.72□□□□□ -2.29
MRPL40P36534 YPR159C-AYPR159C-A 102 nt0.72□□□□□ -2.29
MRPL40P36534 snR51snR51 107 nt0.72□□□□□ -2.29
MRPL40P36534 YMR031W-AYMR031W-A 327 nt0.71□□□□□ -2.3
MRPL40P36534 SEC1YDR164C 2175 nt0.71□□□□□ -2.3
MRPL40P36534 GEA2YEL022W 4380 nt0.71□□□□□ -2.3
MRPL40P36534 ULP2YIL031W 3105 nt0.71□□□□□ -2.3
MRPL40P36534 snR72snR72 98 nt0.7□□□□□ -2.3
MRPL40P36534 YOL013W-BYOL013W-B 291 nt0.7□□□□□ -2.3
MRPL40P36534 CUL3YGR003W 2235 nt0.69□□□□□ -2.3
MRPL40P36534 SDH7YDR511W 402 nt0.69□□□□□ -2.3
MRPL40P36534 YHR063W-AYHR063W-A 336 nt0.69□□□□□ -2.3
MRPL40P36534 YKL145W-AYKL145W-A 93 nt0.69□□□□□ -2.3
MRPL40P36534 RKR1YMR247C 4689 nt0.69□□□□□ -2.3
MRPL40P36534 YOR192C-CYOR192C-C 237 nt0.69□□□□□ -2.3
MRPL40P36534 INP2YMR163C 2118 nt0.67□□□□□ -2.3
MRPL40P36534 FYV7YLR068W 456 nt0.67□□□□□ -2.3
MRPL40P36534 YNL058CYNL058C 951 nt0.67□□□□□ -2.3
MRPL40P36534 YER006C-AYER006C-A 318 nt0.66□□□□□ -2.3
MRPL40P36534 BFR2YDR299W 1605 nt0.65□□□□□ -2.31
MRPL40P36534 ECM12YHR021W-A 456 nt0.65□□□□□ -2.31
MRPL40P36534 PMP1YCR024C-A 123 nt0.64□□□□□ -2.31
MRPL40P36534 CBS1YDL069C 690 nt0.64□□□□□ -2.31
MRPL40P36534 YHL041WYHL041W 450 nt0.64□□□□□ -2.31
MRPL40P36534 YKL083WYKL083W 615 nt0.64□□□□□ -2.31
MRPL40P36534 YLR101CYLR101C 396 nt0.64□□□□□ -2.31
MRPL40P36534 snR189snR189 189 nt0.64□□□□□ -2.31
MRPL40P36534 YAL016C-BYAL016C-B 186 nt0.63□□□□□ -2.31
MRPL40P36534 NOP9YJL010C 2001 nt0.62□□□□□ -2.31
MRPL40P36534 IQG1YPL242C 4488 nt0.62□□□□□ -2.31
MRPL40P36534 AI1Q0050 2505 nt0.62□□□□□ -2.31
MRPL40P36534 RPS20YHL015W 366 nt0.62□□□□□ -2.31
MRPL40P36534 YAR047CYAR047C 321 nt0.62□□□□□ -2.31
MRPL40P36534 RPL38YLR325C 237 nt0.62□□□□□ -2.31
MRPL40P36534 THO2YNL139C 4794 nt0.62□□□□□ -2.31
MRPL40P36534 YLL007CYLL007C 1998 nt0.61□□□□□ -2.31
MRPL40P36534 YBL008W-AYBL008W-A 240 nt0.61□□□□□ -2.31
MRPL40P36534 FMP27YLR454W 7887 nt0.61□□□□□ -2.31
MRPL40P36534 LTE1YAL024C 4308 nt0.6□□□□□ -2.31
MRPL40P36534 ATG31YDR022C 591 nt0.6□□□□□ -2.31
MRPL40P36534 YEL030C-AYEL030C-A 315 nt0.6□□□□□ -2.31
MRPL40P36534 YGR174W-AYGR174W-A 87 nt0.6□□□□□ -2.31
MRPL40P36534 UBC7YMR022W 498 nt0.6□□□□□ -2.31
MRPL40P36534 snR41snR41 95 nt0.6□□□□□ -2.31
MRPL40P36534 PTP2YOR208W 2253 nt0.6□□□□□ -2.31
MRPL40P36534 YAP6YDR259C 1152 nt0.59□□□□□ -2.31
MRPL40P36534 MAM33YIL070C 801 nt0.59□□□□□ -2.31
MRPL40P36534 YMR321CYMR321C 318 nt0.59□□□□□ -2.31
MRPL40P36534 MRPL50YNR022C 420 nt0.59□□□□□ -2.31
MRPL40P36534 YPL185WYPL185W 396 nt0.59□□□□□ -2.31
MRPL40P36534 YML002WYML002W 2214 nt0.58□□□□□ -2.32
MRPL40P36534 STE5YDR103W 2754 nt0.58□□□□□ -2.32
MRPL40P36534 NIP100YPL174C 2607 nt0.58□□□□□ -2.32
MRPL40P36534 RPL26AYLR344W 384 nt0.58□□□□□ -2.32
MRPL40P36534 TOM22YNL131W 459 nt0.58□□□□□ -2.32
MRPL40P36534 YOR218CYOR218C 420 nt0.58□□□□□ -2.32
MRPL40P36534 YPL044CYPL044C 549 nt0.58□□□□□ -2.32
MRPL40P36534 NPR2YEL062W 1848 nt0.58□□□□□ -2.32
MRPL40P36534 TRS65YGR166W 1683 nt0.58□□□□□ -2.32
MRPL40P36534 PCF11YDR228C 1881 nt0.58□□□□□ -2.32
MRPL40P36534 CHS6YJL099W 2241 nt0.57□□□□□ -2.32
MRPL40P36534 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
MRPL40P36534 YDR344CYDR344C 444 nt0.57□□□□□ -2.32
MRPL40P36534 YSP1YHR155W 3687 nt0.56□□□□□ -2.32
MRPL40P36534 YBR064WYBR064W 429 nt0.56□□□□□ -2.32
MRPL40P36534 YJR011CYJR011C 786 nt0.55□□□□□ -2.32
MRPL40P36534 OLI1Q0130 231 nt0.54□□□□□ -2.32
MRPL40P36534 YML007C-AYML007C-A 111 nt0.53□□□□□ -2.32
MRPL40P36534 YPR002C-AYPR002C-A 198 nt0.53□□□□□ -2.32
MRPL40P36534 YBR206WYBR206W 324 nt0.53□□□□□ -2.32
MRPL40P36534 YNL303WYNL303W 348 nt0.52□□□□□ -2.33
MRPL40P36534 MCM10YIL150C 1716 nt0.5□□□□□ -2.33
MRPL40P36534 RPS24BYIL069C 408 nt0.5□□□□□ -2.33
MRPL40P36534 BSC3YLR465C 309 nt0.5□□□□□ -2.33
MRPL40P36534 PAA1YDR071C 576 nt0.49□□□□□ -2.33
MRPL40P36534 YLR456WYLR456W 615 nt0.49□□□□□ -2.33
MRPL40P36534 SPO21YOL091W 1830 nt0.48□□□□□ -2.33
MRPL40P36534 ATP19YOL077W-A 207 nt0.48□□□□□ -2.33
MRPL40P36534 YIL134C-AYIL134C-A 204 nt0.47□□□□□ -2.33
MRPL40P36534 BEM3YPL115C 3387 nt0.46□□□□□ -2.34
MRPL40P36534 BUL2YML111W 2763 nt0.46□□□□□ -2.34
MRPL40P36534 FYV10YIL097W 1551 nt0.45□□□□□ -2.34
MRPL40P36534 RPL26BYGR034W 384 nt0.44□□□□□ -2.34
MRPL40P36534 YDR426CYDR426C 378 nt0.43□□□□□ -2.34
MRPL40P36534 ASE1YOR058C 2658 nt0.43□□□□□ -2.34
MRPL40P36534 HMRA2YCR096C 360 nt0.42□□□□□ -2.34
MRPL40P36534 YJL127W-AYJL127W-A 117 nt0.42□□□□□ -2.34
MRPL40P36534 PCC1YKR095W-A 267 nt0.42□□□□□ -2.34
MRPL40P36534 ABF2YMR072W 552 nt0.42□□□□□ -2.34
MRPL40P36534 MLP1YKR095W 5628 nt0.41□□□□□ -2.34
MRPL40P36534 YOR053WYOR053W 342 nt0.4□□□□□ -2.35
MRPL40P36534 SEC8YPR055W 3198 nt0.4□□□□□ -2.35
MRPL40P36534 PET111YMR257C 2403 nt0.39□□□□□ -2.35
MRPL40P36534 YOR011W-AYOR011W-A 207 nt0.37□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 93.3 ms