Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 ECL1YGR146C 636 nt0.7□□□□□ -2.3
VPS3P23643 YKL145W-AYKL145W-A 93 nt0.7□□□□□ -2.3
VPS3P23643 YMR031W-AYMR031W-A 327 nt0.7□□□□□ -2.3
VPS3P23643 YOL160WYOL160W 342 nt0.7□□□□□ -2.3
VPS3P23643 YPL261CYPL261C 309 nt0.7□□□□□ -2.3
VPS3P23643 snR189snR189 189 nt0.7□□□□□ -2.3
VPS3P23643 GPG1YGL121C 381 nt0.69□□□□□ -2.3
VPS3P23643 UBC7YMR022W 498 nt0.69□□□□□ -2.3
VPS3P23643 YMR272W-AYMR272W-A 114 nt0.69□□□□□ -2.3
VPS3P23643 YHL042WYHL042W 453 nt0.68□□□□□ -2.3
VPS3P23643 YOL013W-BYOL013W-B 291 nt0.68□□□□□ -2.3
VPS3P23643 CBS1YDL069C 690 nt0.67□□□□□ -2.3
VPS3P23643 snR51snR51 107 nt0.67□□□□□ -2.3
VPS3P23643 RAD34YDR314C 2079 nt0.67□□□□□ -2.3
VPS3P23643 BIR1YJR089W 2865 nt0.67□□□□□ -2.3
VPS3P23643 PKH2YOL100W 3246 nt0.66□□□□□ -2.3
VPS3P23643 SDH7YDR511W 402 nt0.66□□□□□ -2.3
VPS3P23643 YLR101CYLR101C 396 nt0.66□□□□□ -2.3
VPS3P23643 TOM22YNL131W 459 nt0.66□□□□□ -2.3
VPS3P23643 YPL229WYPL229W 621 nt0.66□□□□□ -2.3
VPS3P23643 GEA2YEL022W 4380 nt0.66□□□□□ -2.3
VPS3P23643 ALG13YGL047W 609 nt0.65□□□□□ -2.31
VPS3P23643 DBP6YNR038W 1890 nt0.65□□□□□ -2.31
VPS3P23643 ISD11YER048W-A 285 nt0.64□□□□□ -2.31
VPS3P23643 IES4YOR189W 351 nt0.64□□□□□ -2.31
VPS3P23643 snR41snR41 95 nt0.64□□□□□ -2.31
VPS3P23643 YAP6YDR259C 1152 nt0.63□□□□□ -2.31
VPS3P23643 YHL041WYHL041W 450 nt0.63□□□□□ -2.31
VPS3P23643 YKL083WYKL083W 615 nt0.63□□□□□ -2.31
VPS3P23643 BFR2YDR299W 1605 nt0.63□□□□□ -2.31
VPS3P23643 YER006C-AYER006C-A 318 nt0.62□□□□□ -2.31
VPS3P23643 YBL008W-AYBL008W-A 240 nt0.62□□□□□ -2.31
VPS3P23643 YNL303WYNL303W 348 nt0.62□□□□□ -2.31
VPS3P23643 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
VPS3P23643 INP2YMR163C 2118 nt0.61□□□□□ -2.31
VPS3P23643 YIR044CYIR044C 186 nt0.61□□□□□ -2.31
VPS3P23643 RPL26AYLR344W 384 nt0.61□□□□□ -2.31
VPS3P23643 MRPL50YNR022C 420 nt0.61□□□□□ -2.31
VPS3P23643 ATP19YOL077W-A 207 nt0.61□□□□□ -2.31
VPS3P23643 RPL38YLR325C 237 nt0.6□□□□□ -2.31
VPS3P23643 YOR218CYOR218C 420 nt0.6□□□□□ -2.31
VPS3P23643 PMP1YCR024C-A 123 nt0.59□□□□□ -2.31
VPS3P23643 YAR047CYAR047C 321 nt0.59□□□□□ -2.31
VPS3P23643 YML002WYML002W 2214 nt0.58□□□□□ -2.32
VPS3P23643 YHR063W-AYHR063W-A 336 nt0.58□□□□□ -2.32
VPS3P23643 YMR321CYMR321C 318 nt0.58□□□□□ -2.32
VPS3P23643 YNL058CYNL058C 951 nt0.58□□□□□ -2.32
VPS3P23643 PCF11YDR228C 1881 nt0.58□□□□□ -2.32
VPS3P23643 UTP10YJL109C 5310 nt0.58□□□□□ -2.32
VPS3P23643 NIP100YPL174C 2607 nt0.57□□□□□ -2.32
VPS3P23643 CUL3YGR003W 2235 nt0.57□□□□□ -2.32
VPS3P23643 NOP9YJL010C 2001 nt0.57□□□□□ -2.32
VPS3P23643 ATG31YDR022C 591 nt0.57□□□□□ -2.32
VPS3P23643 MAM33YIL070C 801 nt0.57□□□□□ -2.32
VPS3P23643 YOR282WYOR282W 321 nt0.57□□□□□ -2.32
VPS3P23643 YBR064WYBR064W 429 nt0.57□□□□□ -2.32
VPS3P23643 YLL007CYLL007C 1998 nt0.56□□□□□ -2.32
VPS3P23643 YDR344CYDR344C 444 nt0.56□□□□□ -2.32
VPS3P23643 RPS20YHL015W 366 nt0.56□□□□□ -2.32
VPS3P23643 ECM12YHR021W-A 456 nt0.56□□□□□ -2.32
VPS3P23643 ULP2YIL031W 3105 nt0.55□□□□□ -2.32
VPS3P23643 YJR011CYJR011C 786 nt0.55□□□□□ -2.32
VPS3P23643 TRS65YGR166W 1683 nt0.55□□□□□ -2.32
VPS3P23643 YGR174W-AYGR174W-A 87 nt0.54□□□□□ -2.32
VPS3P23643 RPS24BYIL069C 408 nt0.54□□□□□ -2.32
VPS3P23643 YBR206WYBR206W 324 nt0.54□□□□□ -2.32
VPS3P23643 CHS6YJL099W 2241 nt0.53□□□□□ -2.32
VPS3P23643 AI1Q0050 2505 nt0.53□□□□□ -2.32
VPS3P23643 YPL044CYPL044C 549 nt0.52□□□□□ -2.33
VPS3P23643 MCM10YIL150C 1716 nt0.52□□□□□ -2.33
VPS3P23643 FMP27YLR454W 7887 nt0.52□□□□□ -2.33
VPS3P23643 NPR2YEL062W 1848 nt0.51□□□□□ -2.33
VPS3P23643 OLI1Q0130 231 nt0.51□□□□□ -2.33
VPS3P23643 YML007C-AYML007C-A 111 nt0.5□□□□□ -2.33
VPS3P23643 YPR002C-AYPR002C-A 198 nt0.5□□□□□ -2.33
VPS3P23643 PTP2YOR208W 2253 nt0.49□□□□□ -2.33
VPS3P23643 YLR456WYLR456W 615 nt0.49□□□□□ -2.33
VPS3P23643 BSC3YLR465C 309 nt0.49□□□□□ -2.33
VPS3P23643 THO2YNL139C 4794 nt0.49□□□□□ -2.33
VPS3P23643 ASE1YOR058C 2658 nt0.47□□□□□ -2.33
VPS3P23643 YSP1YHR155W 3687 nt0.47□□□□□ -2.33
VPS3P23643 YPL185WYPL185W 396 nt0.47□□□□□ -2.33
VPS3P23643 YDR426CYDR426C 378 nt0.46□□□□□ -2.34
VPS3P23643 YLR434CYLR434C 384 nt0.45□□□□□ -2.34
VPS3P23643 YFR012W-AYFR012W-A 87 nt0.44□□□□□ -2.34
VPS3P23643 IQG1YPL242C 4488 nt0.44□□□□□ -2.34
VPS3P23643 STE5YDR103W 2754 nt0.43□□□□□ -2.34
VPS3P23643 YIL134C-AYIL134C-A 204 nt0.43□□□□□ -2.34
VPS3P23643 FYV10YIL097W 1551 nt0.42□□□□□ -2.34
VPS3P23643 YJL007CYJL007C 315 nt0.42□□□□□ -2.34
VPS3P23643 RPL26BYGR034W 384 nt0.41□□□□□ -2.34
VPS3P23643 SPO21YOL091W 1830 nt0.41□□□□□ -2.34
VPS3P23643 PAA1YDR071C 576 nt0.4□□□□□ -2.35
VPS3P23643 PCC1YKR095W-A 267 nt0.4□□□□□ -2.35
VPS3P23643 YLR406C-AYLR406C-A 150 nt0.4□□□□□ -2.35
VPS3P23643 ABF2YMR072W 552 nt0.39□□□□□ -2.35
VPS3P23643 YNL211CYNL211C 261 nt0.39□□□□□ -2.35
VPS3P23643 YOR053WYOR053W 342 nt0.39□□□□□ -2.35
VPS3P23643 YJL127W-AYJL127W-A 117 nt0.38□□□□□ -2.35
VPS3P23643 BUL2YML111W 2763 nt0.38□□□□□ -2.35
Retrieved 100 of 7,029 protein–RNA pairs in 33.6 ms