Protein–RNA interactions for Protein: A0A140LIP3

4933424G06Rik, RIKEN cDNA 4933424G06 gene, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
4933424G06RikA0A140LIP3 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
4933424G06RikA0A140LIP3 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm10013-201ENSMUST00000106074 672 ntBASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
4933424G06RikA0A140LIP3 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm6659-201ENSMUST00000174752 547 ntBASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm7791-201ENSMUST00000219066 539 ntBASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Rarb-207ENSMUST00000225921 2756 ntBASIC17.74■□□□□ 0.43
4933424G06RikA0A140LIP3 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm37025-201ENSMUST00000195159 829 ntBASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
4933424G06RikA0A140LIP3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm5828-201ENSMUST00000071842 1860 ntBASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Gm18032-201ENSMUST00000222541 538 ntBASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
4933424G06RikA0A140LIP3 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
4933424G06RikA0A140LIP3 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms