Protein–RNA interactions for Protein: Q3U435

Mmp25, Matrix metalloproteinase-25, mousemouse

Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp25Q3U435 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Mmp25Q3U435 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Mmp25Q3U435 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
Mmp25Q3U435 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 AC135963.1-201ENSMUST00000211640 717 ntBASIC16.39■□□□□ 0.21
Mmp25Q3U435 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.39■□□□□ 0.21
Mmp25Q3U435 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Mmp25Q3U435 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Mmp25Q3U435 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Gm37025-201ENSMUST00000195159 829 ntBASIC16.37■□□□□ 0.21
Mmp25Q3U435 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.37■□□□□ 0.21
Mmp25Q3U435 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.36■□□□□ 0.21
Mmp25Q3U435 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Gm30025-201ENSMUST00000218555 728 ntBASIC16.36■□□□□ 0.21
Mmp25Q3U435 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Mmp25Q3U435 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms