Protein–RNA interactions for Protein: Q7M732

Rtl1, Retrotransposon-like protein 1, mousemouse

Predictions only

Length 1,744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl1Q7M732 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rtl1Q7M732 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rtl1Q7M732 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC31.18■■■□□ 2.58
Rtl1Q7M732 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Gm33142-201ENSMUST00000193913 867 ntBASIC31.17■■■□□ 2.58
Rtl1Q7M732 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC31.17■■■□□ 2.58
Rtl1Q7M732 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rtl1Q7M732 Mir5130-201ENSMUST00000175160 84 ntBASIC31.16■■■□□ 2.58
Rtl1Q7M732 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC31.16■■■□□ 2.58
Rtl1Q7M732 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rtl1Q7M732 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rtl1Q7M732 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Rtl1Q7M732 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
Rtl1Q7M732 AA414768-201ENSMUST00000121924 1257 ntBASIC31.15■■■□□ 2.58
Rtl1Q7M732 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtl1Q7M732 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC31.15■■■□□ 2.58
Rtl1Q7M732 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC31.15■■■□□ 2.58
Rtl1Q7M732 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC31.14■■■□□ 2.58
Rtl1Q7M732 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC31.14■■■□□ 2.57
Rtl1Q7M732 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC31.13■■■□□ 2.57
Rtl1Q7M732 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtl1Q7M732 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtl1Q7M732 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtl1Q7M732 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtl1Q7M732 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rtl1Q7M732 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC31.12■■■□□ 2.57
Rtl1Q7M732 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
Rtl1Q7M732 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC31.11■■■□□ 2.57
Rtl1Q7M732 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC31.1■■■□□ 2.57
Rtl1Q7M732 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Rtl1Q7M732 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC31.09■■■□□ 2.57
Rtl1Q7M732 AC125311.2-201ENSMUST00000227477 1940 ntBASIC31.09■■■□□ 2.57
Rtl1Q7M732 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Rtl1Q7M732 Spsb2-203ENSMUST00000112473 1322 ntBASIC31.08■■■□□ 2.57
Rtl1Q7M732 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rtl1Q7M732 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rtl1Q7M732 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC31.08■■■□□ 2.57
Rtl1Q7M732 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC31.08■■■□□ 2.57
Rtl1Q7M732 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms