Protein–RNA interactions for Protein: J3QMS7

Gm11236, Predicted gene 11236, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11236J3QMS7 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Gm11236J3QMS7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Gm11236J3QMS7 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Actl10-202ENSMUST00000226583 1501 ntBASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Gm11236J3QMS7 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Gm11236J3QMS7 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Gm11236J3QMS7 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm11236J3QMS7 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.27■□□□□ 0.51
Gm11236J3QMS7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm11236J3QMS7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm11236J3QMS7 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Gm11236J3QMS7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Gm17808-201ENSMUST00000200859 894 ntBASIC18.26■□□□□ 0.51
Gm11236J3QMS7 AC159205.3-201ENSMUST00000224614 874 ntBASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Gm11236J3QMS7 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Gm11236J3QMS7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms