Protein–RNA interactions for Protein: P09793

Ctla4, Cytotoxic T-lymphocyte protein 4, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctla4P09793 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC16.31■□□□□ 0.2
Ctla4P09793 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.31■□□□□ 0.2
Ctla4P09793 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Ctla4P09793 Gm45141-201ENSMUST00000206502 1888 ntBASIC16.31■□□□□ 0.2
Ctla4P09793 Idnk-204ENSMUST00000226010 1898 ntBASIC16.31■□□□□ 0.2
Ctla4P09793 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.3■□□□□ 0.2
Ctla4P09793 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC16.3■□□□□ 0.2
Ctla4P09793 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Gm9484-201ENSMUST00000195892 1159 ntBASIC16.3■□□□□ 0.2
Ctla4P09793 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.3■□□□□ 0.2
Ctla4P09793 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Ctla4P09793 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Ctla4P09793 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Ctla4P09793 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctla4P09793 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Ctla4P09793 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC16.29■□□□□ 0.2
Ctla4P09793 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Gm5417-201ENSMUST00000079706 384 ntBASIC16.29■□□□□ 0.2
Ctla4P09793 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Ctla4P09793 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.29■□□□□ 0.2
Ctla4P09793 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Ctla4P09793 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.29■□□□□ 0.2
Ctla4P09793 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.28■□□□□ 0.2
Ctla4P09793 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.28■□□□□ 0.2
Ctla4P09793 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ctla4P09793 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Ctla4P09793 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Ctla4P09793 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Ctla4P09793 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC16.27■□□□□ 0.2
Ctla4P09793 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.27■□□□□ 0.2
Ctla4P09793 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.27■□□□□ 0.2
Ctla4P09793 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.27■□□□□ 0.2
Ctla4P09793 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.27■□□□□ 0.2
Ctla4P09793 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Ctla4P09793 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctla4P09793 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.27■□□□□ 0.19
Ctla4P09793 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctla4P09793 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Ctla4P09793 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctla4P09793 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctla4P09793 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctla4P09793 Gm12085-201ENSMUST00000119263 940 ntBASIC16.26■□□□□ 0.19
Ctla4P09793 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ctla4P09793 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.26■□□□□ 0.19
Ctla4P09793 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.26■□□□□ 0.19
Ctla4P09793 Gm20472-201ENSMUST00000174403 1240 ntBASIC16.26■□□□□ 0.19
Ctla4P09793 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.26■□□□□ 0.19
Ctla4P09793 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms