Protein–RNA interactions for Protein: Q3ULM6

Uspl1, SUMO-specific isopeptidase USPL1, mousemouse

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uspl1Q3ULM6 Gm9694-201ENSMUST00000193347 1189 ntBASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Gm43702-201ENSMUST00000198772 2546 ntBASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Uspl1Q3ULM6 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Gm9484-201ENSMUST00000195892 1159 ntBASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Uspl1Q3ULM6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC22.73■■□□□ 1.23
Uspl1Q3ULM6 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Gm12085-201ENSMUST00000119263 940 ntBASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Odf3b-204ENSMUST00000227834 930 ntBASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC22.72■■□□□ 1.23
Uspl1Q3ULM6 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Otx2os1-204ENSMUST00000227221 751 ntBASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Uspl1Q3ULM6 Gm38027-201ENSMUST00000192315 235 ntBASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 AL672049.1-201ENSMUST00000197943 91 ntBASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Gm3375-201ENSMUST00000203929 796 ntBASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Gm10252-201ENSMUST00000209541 832 ntBASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Timm23-208ENSMUST00000226683 750 ntBASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Uspl1Q3ULM6 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Uspl1Q3ULM6 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Gm37519-201ENSMUST00000191687 2210 ntBASIC22.68■■□□□ 1.22
Uspl1Q3ULM6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms