Protein–RNA interactions for Protein: A6NKF2

ARID3C, AT-rich interactive domain-containing protein 3C, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARID3CA6NKF2 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 AL390955.1-201ENST00000428694 934 ntBASIC31.85■■■□□ 2.69
ARID3CA6NKF2 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.85■■■□□ 2.69
ARID3CA6NKF2 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
ARID3CA6NKF2 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 KRT16P5-201ENST00000455284 522 ntBASIC31.83■■■□□ 2.69
ARID3CA6NKF2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 DECR2-212ENST00000627716 352 ntTSL 2 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.83■■■□□ 2.69
ARID3CA6NKF2 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.69
ARID3CA6NKF2 SRI-203ENST00000419179 1307 ntTSL 2 BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 P4HB-223ENST00000576390 439 ntTSL 4 BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 AC092865.7-201ENST00000641832 219 ntBASIC31.82■■■□□ 2.68
ARID3CA6NKF2 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
ARID3CA6NKF2 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 DYM-203ENST00000442713 2147 ntTSL 2 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 MIR1238-201ENST00000408483 83 ntBASIC31.81■■■□□ 2.68
ARID3CA6NKF2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 AC145285.6-201ENST00000604632 637 ntBASIC31.81■■■□□ 2.68
ARID3CA6NKF2 REXO1L10P-201ENST00000615707 1290 ntBASIC31.81■■■□□ 2.68
ARID3CA6NKF2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
ARID3CA6NKF2 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 PNN-205ENST00000556530 601 ntTSL 2 BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 AC005363.2-201ENST00000618631 242 ntBASIC31.8■■■□□ 2.68
ARID3CA6NKF2 AL121829.2-201ENST00000620908 328 ntBASIC31.8■■■□□ 2.68
ARID3CA6NKF2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
ARID3CA6NKF2 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
ARID3CA6NKF2 CYP2D8P-201ENST00000433633 1490 ntBASIC31.78■■■□□ 2.68
ARID3CA6NKF2 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
ARID3CA6NKF2 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARID3CA6NKF2 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC31.78■■■□□ 2.68
ARID3CA6NKF2 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC31.78■■■□□ 2.68
ARID3CA6NKF2 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARID3CA6NKF2 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
ARID3CA6NKF2 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC31.77■■■□□ 2.68
ARID3CA6NKF2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
ARID3CA6NKF2 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
ARID3CA6NKF2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms