Protein–RNA interactions for Protein: Q3TYX8

Rufy4, RUN and FYVE domain-containing protein 4, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rufy4Q3TYX8 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
Rufy4Q3TYX8 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rufy4Q3TYX8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Gm4974-201ENSMUST00000209974 875 ntBASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Gm9987-201ENSMUST00000069768 567 ntBASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rufy4Q3TYX8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rufy4Q3TYX8 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Gm13559-201ENSMUST00000120476 863 ntBASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rufy4Q3TYX8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rufy4Q3TYX8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Rufy4Q3TYX8 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rufy4Q3TYX8 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rufy4Q3TYX8 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gm13836-201ENSMUST00000121159 501 ntBASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rufy4Q3TYX8 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms