Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col10a1Q05306 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.26■□□□□ 0.19
Col10a1Q05306 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Col10a1Q05306 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Col10a1Q05306 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Col10a1Q05306 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Gm10461-201ENSMUST00000202073 4786 ntBASIC16.25■□□□□ 0.19
Col10a1Q05306 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.25■□□□□ 0.19
Col10a1Q05306 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Col10a1Q05306 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Gm15378-201ENSMUST00000121894 207 ntBASIC16.25■□□□□ 0.19
Col10a1Q05306 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.25■□□□□ 0.19
Col10a1Q05306 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.25■□□□□ 0.19
Col10a1Q05306 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Col10a1Q05306 Gm18025-201ENSMUST00000221733 862 ntBASIC16.25■□□□□ 0.19
Col10a1Q05306 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.25■□□□□ 0.19
Col10a1Q05306 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Col10a1Q05306 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Col10a1Q05306 Idnk-204ENSMUST00000226010 1898 ntBASIC16.25■□□□□ 0.19
Col10a1Q05306 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Col10a1Q05306 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Col10a1Q05306 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.23■□□□□ 0.19
Col10a1Q05306 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.23■□□□□ 0.19
Col10a1Q05306 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Col10a1Q05306 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col10a1Q05306 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.22■□□□□ 0.19
Col10a1Q05306 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.22■□□□□ 0.19
Col10a1Q05306 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Gm29791-202ENSMUST00000207888 369 ntBASIC16.22■□□□□ 0.19
Col10a1Q05306 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.22■□□□□ 0.19
Col10a1Q05306 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Col10a1Q05306 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.22■□□□□ 0.19
Col10a1Q05306 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Col10a1Q05306 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col10a1Q05306 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Col10a1Q05306 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms