Protein–RNA interactions for Protein: Q61345

Foxd1, Forkhead box protein D1, mousemouse

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd1Q61345 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Foxd1Q61345 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Foxd1Q61345 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Foxd1Q61345 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.45■□□□□ 0.87
Foxd1Q61345 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.45■□□□□ 0.86
Foxd1Q61345 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.45■□□□□ 0.86
Foxd1Q61345 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Foxd1Q61345 Mir3081-201ENSMUST00000175305 84 ntBASIC20.45■□□□□ 0.86
Foxd1Q61345 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Gm10576-201ENSMUST00000191927 825 ntBASIC20.45■□□□□ 0.86
Foxd1Q61345 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC20.45■□□□□ 0.86
Foxd1Q61345 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Foxd1Q61345 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Foxd1Q61345 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Foxd1Q61345 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Foxd1Q61345 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxd1Q61345 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxd1Q61345 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.44■□□□□ 0.86
Foxd1Q61345 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Foxd1Q61345 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxd1Q61345 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxd1Q61345 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Foxd1Q61345 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Foxd1Q61345 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Foxd1Q61345 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Foxd1Q61345 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Foxd1Q61345 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Foxd1Q61345 AC160393.1-201ENSMUST00000218378 1279 ntBASIC20.43■□□□□ 0.86
Foxd1Q61345 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxd1Q61345 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Foxd1Q61345 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Foxd1Q61345 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxd1Q61345 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.42■□□□□ 0.86
Foxd1Q61345 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxd1Q61345 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxd1Q61345 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.42■□□□□ 0.86
Foxd1Q61345 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.42■□□□□ 0.86
Foxd1Q61345 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxd1Q61345 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxd1Q61345 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Foxd1Q61345 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Foxd1Q61345 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Foxd1Q61345 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Foxd1Q61345 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Foxd1Q61345 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Foxd1Q61345 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.4■□□□□ 0.86
Foxd1Q61345 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxd1Q61345 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Foxd1Q61345 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Foxd1Q61345 Gm5864-201ENSMUST00000202263 970 ntBASIC20.4■□□□□ 0.86
Foxd1Q61345 Gm10138-203ENSMUST00000206952 366 ntBASIC20.4■□□□□ 0.86
Foxd1Q61345 AC140264.2-202ENSMUST00000218746 817 ntBASIC20.4■□□□□ 0.86
Foxd1Q61345 Gm7791-201ENSMUST00000219066 539 ntBASIC20.4■□□□□ 0.86
Foxd1Q61345 Wnt10b-205ENSMUST00000226846 1204 ntBASIC20.4■□□□□ 0.86
Foxd1Q61345 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxd1Q61345 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxd1Q61345 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Foxd1Q61345 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Foxd1Q61345 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Foxd1Q61345 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Foxd1Q61345 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Foxd1Q61345 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Foxd1Q61345 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxd1Q61345 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
Foxd1Q61345 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC20.39■□□□□ 0.85
Foxd1Q61345 Spem1-201ENSMUST00000045771 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxd1Q61345 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxd1Q61345 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxd1Q61345 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Foxd1Q61345 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Foxd1Q61345 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Foxd1Q61345 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Foxd1Q61345 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.38■□□□□ 0.85
Foxd1Q61345 Gm27357-201ENSMUST00000183754 135 ntBASIC20.38■□□□□ 0.85
Foxd1Q61345 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 70.5 ms