Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Mre11Q61216 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Mre11Q61216 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mre11Q61216 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Mre11Q61216 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mre11Q61216 Gm26971-201ENSMUST00000182423 1072 ntBASIC21.2■□□□□ 0.98
Mre11Q61216 AC137127.1-201ENSMUST00000213466 1078 ntBASIC21.2■□□□□ 0.98
Mre11Q61216 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Mre11Q61216 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Mre11Q61216 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Mre11Q61216 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC21.19■□□□□ 0.98
Mre11Q61216 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Mre11Q61216 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Mre11Q61216 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Mre11Q61216 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Mre11Q61216 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Mre11Q61216 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC21.18■□□□□ 0.98
Mre11Q61216 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Mre11Q61216 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Gm27801-201ENSMUST00000184174 223 ntBASIC21.18■□□□□ 0.98
Mre11Q61216 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Mre11Q61216 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.17■□□□□ 0.98
Mre11Q61216 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Mre11Q61216 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Mre11Q61216 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Mre11Q61216 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Mre11Q61216 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.16■□□□□ 0.98
Mre11Q61216 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Mre11Q61216 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Mre11Q61216 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Mre11Q61216 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 AC069562.2-201ENSMUST00000224644 2146 ntBASIC21.15■□□□□ 0.98
Mre11Q61216 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Mre11Q61216 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Gm26917-202ENSMUST00000192833 3329 ntBASIC21.15■□□□□ 0.98
Mre11Q61216 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Mre11Q61216 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Mre11Q61216 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Mre11Q61216 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mre11Q61216 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Mre11Q61216 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC21.14■□□□□ 0.97
Mre11Q61216 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Mre11Q61216 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms