Protein–RNA interactions for Protein: Q3UX49

C87499, Expressed sequence C87499, mousemouse

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C87499Q3UX49 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C87499Q3UX49 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
C87499Q3UX49 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
C87499Q3UX49 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C87499Q3UX49 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C87499Q3UX49 Fcho2-208ENSMUST00000224992 2964 ntBASIC20.08■□□□□ 0.81
C87499Q3UX49 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C87499Q3UX49 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
C87499Q3UX49 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
C87499Q3UX49 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C87499Q3UX49 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.08■□□□□ 0.81
C87499Q3UX49 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
C87499Q3UX49 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC20.08■□□□□ 0.8
C87499Q3UX49 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
C87499Q3UX49 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC20.07■□□□□ 0.8
C87499Q3UX49 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 AC163280.1-201ENSMUST00000228194 1100 ntBASIC20.07■□□□□ 0.8
C87499Q3UX49 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
C87499Q3UX49 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
C87499Q3UX49 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
C87499Q3UX49 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC20.06■□□□□ 0.8
C87499Q3UX49 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
C87499Q3UX49 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Nrn1-203ENSMUST00000223611 1443 ntBASIC20.05■□□□□ 0.8
C87499Q3UX49 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.05■□□□□ 0.8
C87499Q3UX49 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.05■□□□□ 0.8
C87499Q3UX49 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC20.05■□□□□ 0.8
C87499Q3UX49 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC20.05■□□□□ 0.8
C87499Q3UX49 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.05■□□□□ 0.8
C87499Q3UX49 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
C87499Q3UX49 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
C87499Q3UX49 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 AC108858.1-201ENSMUST00000228461 1498 ntBASIC20.04■□□□□ 0.8
C87499Q3UX49 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
C87499Q3UX49 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
C87499Q3UX49 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC20.03■□□□□ 0.8
C87499Q3UX49 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
C87499Q3UX49 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
C87499Q3UX49 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Mir2861-201ENSMUST00000175539 82 ntBASIC20.03■□□□□ 0.8
C87499Q3UX49 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.03■□□□□ 0.8
C87499Q3UX49 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
C87499Q3UX49 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
C87499Q3UX49 Gm43702-201ENSMUST00000198772 2546 ntBASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms