Protein–RNA interactions for Protein: P97770

Thumpd3, THUMP domain-containing protein 3, mousemouse

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd3P97770 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.01■□□□□ 0.47
Thumpd3P97770 Gm7290-201ENSMUST00000104990 617 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.01■□□□□ 0.47
Thumpd3P97770 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Gm12918-201ENSMUST00000120234 636 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Gm15710-201ENSMUST00000121821 636 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Gm5075-201ENSMUST00000196916 622 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Thumpd3P97770 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Thumpd3P97770 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC18.01■□□□□ 0.47
Thumpd3P97770 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.01■□□□□ 0.47
Thumpd3P97770 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC18.01■□□□□ 0.47
Thumpd3P97770 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Thumpd3P97770 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Tgds-204ENSMUST00000228543 1594 ntBASIC18■□□□□ 0.47
Thumpd3P97770 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Thumpd3P97770 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18■□□□□ 0.47
Thumpd3P97770 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Gm5408-201ENSMUST00000197998 747 ntBASIC18■□□□□ 0.47
Thumpd3P97770 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18■□□□□ 0.47
Thumpd3P97770 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Thumpd3P97770 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.99■□□□□ 0.47
Thumpd3P97770 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC17.99■□□□□ 0.47
Thumpd3P97770 Gm4968-201ENSMUST00000071458 858 ntBASIC17.99■□□□□ 0.47
Thumpd3P97770 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Thumpd3P97770 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Thumpd3P97770 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC17.98■□□□□ 0.47
Thumpd3P97770 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC17.98■□□□□ 0.47
Thumpd3P97770 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.98■□□□□ 0.47
Thumpd3P97770 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Thumpd3P97770 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Thumpd3P97770 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC17.97■□□□□ 0.47
Thumpd3P97770 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.97■□□□□ 0.47
Thumpd3P97770 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Thumpd3P97770 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.97■□□□□ 0.47
Thumpd3P97770 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.97■□□□□ 0.47
Thumpd3P97770 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Thumpd3P97770 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Gm13148-201ENSMUST00000118892 745 ntBASIC17.96■□□□□ 0.47
Thumpd3P97770 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC17.96■□□□□ 0.47
Thumpd3P97770 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC17.96■□□□□ 0.47
Thumpd3P97770 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Thumpd3P97770 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms