Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Gm4974-201ENSMUST00000209974 875 ntBASIC19.29■□□□□ 0.68
Upb1Q8VC97 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Upb1Q8VC97 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upb1Q8VC97 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Upb1Q8VC97 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upb1Q8VC97 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Upb1Q8VC97 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Upb1Q8VC97 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Upb1Q8VC97 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Gm13401-201ENSMUST00000117074 291 ntBASIC19.28■□□□□ 0.68
Upb1Q8VC97 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Gm3375-201ENSMUST00000203929 796 ntBASIC19.28■□□□□ 0.68
Upb1Q8VC97 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Fst-202ENSMUST00000223640 2612 ntBASIC19.28■□□□□ 0.68
Upb1Q8VC97 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.28■□□□□ 0.68
Upb1Q8VC97 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Upb1Q8VC97 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.27■□□□□ 0.68
Upb1Q8VC97 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.27■□□□□ 0.68
Upb1Q8VC97 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.27■□□□□ 0.68
Upb1Q8VC97 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Upb1Q8VC97 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.27■□□□□ 0.67
Upb1Q8VC97 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upb1Q8VC97 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upb1Q8VC97 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Upb1Q8VC97 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.26■□□□□ 0.67
Upb1Q8VC97 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.26■□□□□ 0.67
Upb1Q8VC97 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.26■□□□□ 0.67
Upb1Q8VC97 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Upb1Q8VC97 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Gm30025-201ENSMUST00000218555 728 ntBASIC19.25■□□□□ 0.67
Upb1Q8VC97 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Upb1Q8VC97 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.25■□□□□ 0.67
Upb1Q8VC97 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC19.24■□□□□ 0.67
Upb1Q8VC97 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Upb1Q8VC97 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Upb1Q8VC97 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms