Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Gm27405-201ENSMUST00000184201 112 ntBASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Trim43aQ3TL54 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Gm7291-201ENSMUST00000199147 382 ntBASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Gm42569-201ENSMUST00000200539 472 ntBASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trim43aQ3TL54 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43aQ3TL54 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trim43aQ3TL54 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.83■□□□□ 0.6
Trim43aQ3TL54 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Trim43aQ3TL54 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43aQ3TL54 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.83■□□□□ 0.6
Trim43aQ3TL54 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.83■□□□□ 0.6
Trim43aQ3TL54 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43aQ3TL54 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43aQ3TL54 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trim43aQ3TL54 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
Trim43aQ3TL54 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Gm10033-202ENSMUST00000211874 928 ntBASIC18.81■□□□□ 0.6
Trim43aQ3TL54 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trim43aQ3TL54 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trim43aQ3TL54 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms