Protein–RNA interactions for Protein: Q05306

Col10a1, Collagen alpha-1(X) chain, mousemouse

Predictions only

Length 680 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col10a1Q05306 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Col10a1Q05306 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Col10a1Q05306 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Col10a1Q05306 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.36■□□□□ 0.21
Col10a1Q05306 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Gm18666-201ENSMUST00000190039 958 ntBASIC16.36■□□□□ 0.21
Col10a1Q05306 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC16.36■□□□□ 0.21
Col10a1Q05306 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.36■□□□□ 0.21
Col10a1Q05306 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Col10a1Q05306 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Col10a1Q05306 Nrn1-203ENSMUST00000223611 1443 ntBASIC16.36■□□□□ 0.21
Col10a1Q05306 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Col10a1Q05306 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Gm5643-201ENSMUST00000117081 966 ntBASIC16.35■□□□□ 0.21
Col10a1Q05306 Gm13168-201ENSMUST00000121771 632 ntBASIC16.35■□□□□ 0.21
Col10a1Q05306 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.35■□□□□ 0.21
Col10a1Q05306 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Col10a1Q05306 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
Col10a1Q05306 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Col10a1Q05306 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col10a1Q05306 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.34■□□□□ 0.21
Col10a1Q05306 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Col10a1Q05306 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.34■□□□□ 0.21
Col10a1Q05306 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC16.34■□□□□ 0.21
Col10a1Q05306 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Col10a1Q05306 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Col10a1Q05306 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Col10a1Q05306 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Col10a1Q05306 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col10a1Q05306 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Col10a1Q05306 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.33■□□□□ 0.21
Col10a1Q05306 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.33■□□□□ 0.21
Col10a1Q05306 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Col10a1Q05306 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Col10a1Q05306 Gm15375-201ENSMUST00000119510 849 ntBASIC16.33■□□□□ 0.2
Col10a1Q05306 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Col10a1Q05306 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Col10a1Q05306 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC16.32■□□□□ 0.2
Col10a1Q05306 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Gm8520-201ENSMUST00000186517 868 ntBASIC16.32■□□□□ 0.2
Col10a1Q05306 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC16.32■□□□□ 0.2
Col10a1Q05306 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.32■□□□□ 0.2
Col10a1Q05306 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.32■□□□□ 0.2
Col10a1Q05306 Gm45560-201ENSMUST00000211492 1472 ntBASIC16.32■□□□□ 0.2
Col10a1Q05306 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Col10a1Q05306 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Col10a1Q05306 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Col10a1Q05306 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.31■□□□□ 0.2
Col10a1Q05306 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Col10a1Q05306 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Col10a1Q05306 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms