Protein–RNA interactions for Protein: Q9Z2V5

Hdac6, Histone deacetylase 6, mousemouse

Predictions only

Length 1,149 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac6Q9Z2V5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC31.63■■■□□ 2.65
Hdac6Q9Z2V5 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Hdac6Q9Z2V5 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
Hdac6Q9Z2V5 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Hdac6Q9Z2V5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.61■■■□□ 2.65
Hdac6Q9Z2V5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Hdac6Q9Z2V5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Hdac6Q9Z2V5 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Hdac6Q9Z2V5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC31.58■■■□□ 2.65
Hdac6Q9Z2V5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Hdac6Q9Z2V5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC31.56■■■□□ 2.64
Hdac6Q9Z2V5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Hdac6Q9Z2V5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Hdac6Q9Z2V5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Hdac6Q9Z2V5 Gm11175-201ENSMUST00000116172 543 ntBASIC31.51■■■□□ 2.63
Hdac6Q9Z2V5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.51■■■□□ 2.63
Hdac6Q9Z2V5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Hdac6Q9Z2V5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.49■■■□□ 2.63
Hdac6Q9Z2V5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Hdac6Q9Z2V5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
Hdac6Q9Z2V5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
Hdac6Q9Z2V5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC31.46■■■□□ 2.63
Hdac6Q9Z2V5 Mir6538-201ENSMUST00000183713 110 ntBASIC31.46■■■□□ 2.63
Hdac6Q9Z2V5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.45■■■□□ 2.63
Hdac6Q9Z2V5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Hdac6Q9Z2V5 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC31.43■■■□□ 2.62
Hdac6Q9Z2V5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC31.42■■■□□ 2.62
Hdac6Q9Z2V5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.41■■■□□ 2.62
Hdac6Q9Z2V5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Hdac6Q9Z2V5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
Hdac6Q9Z2V5 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hdac6Q9Z2V5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
Hdac6Q9Z2V5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Hdac6Q9Z2V5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Hdac6Q9Z2V5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
Hdac6Q9Z2V5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
Hdac6Q9Z2V5 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC31.36■■■□□ 2.61
Hdac6Q9Z2V5 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC31.36■■■□□ 2.61
Hdac6Q9Z2V5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Hdac6Q9Z2V5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Hdac6Q9Z2V5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Hdac6Q9Z2V5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.33■■■□□ 2.61
Hdac6Q9Z2V5 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
Hdac6Q9Z2V5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC31.32■■■□□ 2.6
Hdac6Q9Z2V5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Hdac6Q9Z2V5 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Hdac6Q9Z2V5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Hdac6Q9Z2V5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Hdac6Q9Z2V5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC31.28■■■□□ 2.6
Hdac6Q9Z2V5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC31.28■■■□□ 2.6
Hdac6Q9Z2V5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Hdac6Q9Z2V5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC31.26■■■□□ 2.59
Hdac6Q9Z2V5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hdac6Q9Z2V5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.25■■■□□ 2.59
Hdac6Q9Z2V5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Hdac6Q9Z2V5 Cap2-205ENSMUST00000225824 1634 ntBASIC31.24■■■□□ 2.59
Hdac6Q9Z2V5 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Hdac6Q9Z2V5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC31.2■■■□□ 2.59
Hdac6Q9Z2V5 Gm6345-201ENSMUST00000180378 1691 ntBASIC31.2■■■□□ 2.59
Hdac6Q9Z2V5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.58
Hdac6Q9Z2V5 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
Hdac6Q9Z2V5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.17■■■□□ 2.58
Hdac6Q9Z2V5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
Hdac6Q9Z2V5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
Hdac6Q9Z2V5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC31.16■■■□□ 2.58
Hdac6Q9Z2V5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC31.16■■■□□ 2.58
Hdac6Q9Z2V5 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.15■■■□□ 2.58
Hdac6Q9Z2V5 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC31.15■■■□□ 2.58
Hdac6Q9Z2V5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC31.14■■■□□ 2.58
Hdac6Q9Z2V5 Gm6311-201ENSMUST00000073790 878 ntBASIC31.14■■■□□ 2.58
Hdac6Q9Z2V5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.11■■■□□ 2.57
Hdac6Q9Z2V5 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC31.11■■■□□ 2.57
Hdac6Q9Z2V5 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
Hdac6Q9Z2V5 Gm30023-201ENSMUST00000197970 889 ntBASIC31.1■■■□□ 2.57
Hdac6Q9Z2V5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Hdac6Q9Z2V5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC31.08■■■□□ 2.57
Hdac6Q9Z2V5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Hdac6Q9Z2V5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.08■■■□□ 2.57
Hdac6Q9Z2V5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hdac6Q9Z2V5 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
Hdac6Q9Z2V5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.05■■■□□ 2.56
Hdac6Q9Z2V5 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC31.05■■■□□ 2.56
Hdac6Q9Z2V5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
Hdac6Q9Z2V5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Hdac6Q9Z2V5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Hdac6Q9Z2V5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Retrieved 100 of 76,532 protein–RNA pairs in 60.8 ms