Protein–RNA interactions for Protein: Q9JJK5

Herpud1, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud1Q9JJK5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Herpud1Q9JJK5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Herpud1Q9JJK5 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Herpud1Q9JJK5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud1Q9JJK5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud1Q9JJK5 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Herpud1Q9JJK5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Herpud1Q9JJK5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.09■□□□□ 0.81
Herpud1Q9JJK5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Herpud1Q9JJK5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud1Q9JJK5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud1Q9JJK5 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud1Q9JJK5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud1Q9JJK5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Herpud1Q9JJK5 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud1Q9JJK5 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud1Q9JJK5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud1Q9JJK5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Herpud1Q9JJK5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Herpud1Q9JJK5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Herpud1Q9JJK5 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herpud1Q9JJK5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Herpud1Q9JJK5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herpud1Q9JJK5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Herpud1Q9JJK5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Herpud1Q9JJK5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herpud1Q9JJK5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Herpud1Q9JJK5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Herpud1Q9JJK5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.02■□□□□ 0.8
Herpud1Q9JJK5 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Herpud1Q9JJK5 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20■□□□□ 0.79
Herpud1Q9JJK5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Herpud1Q9JJK5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20■□□□□ 0.79
Herpud1Q9JJK5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Herpud1Q9JJK5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Herpud1Q9JJK5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Herpud1Q9JJK5 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Herpud1Q9JJK5 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Herpud1Q9JJK5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
Herpud1Q9JJK5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herpud1Q9JJK5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herpud1Q9JJK5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herpud1Q9JJK5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Herpud1Q9JJK5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herpud1Q9JJK5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Herpud1Q9JJK5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Herpud1Q9JJK5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herpud1Q9JJK5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Herpud1Q9JJK5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Herpud1Q9JJK5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herpud1Q9JJK5 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herpud1Q9JJK5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herpud1Q9JJK5 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Herpud1Q9JJK5 Pcf11-205ENSMUST00000208255 1720 ntBASIC19.93■□□□□ 0.78
Herpud1Q9JJK5 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Herpud1Q9JJK5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Herpud1Q9JJK5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Herpud1Q9JJK5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Herpud1Q9JJK5 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Herpud1Q9JJK5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Herpud1Q9JJK5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Herpud1Q9JJK5 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Herpud1Q9JJK5 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.88■□□□□ 0.77
Herpud1Q9JJK5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Herpud1Q9JJK5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Herpud1Q9JJK5 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Herpud1Q9JJK5 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Herpud1Q9JJK5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Herpud1Q9JJK5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Herpud1Q9JJK5 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Herpud1Q9JJK5 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Herpud1Q9JJK5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Herpud1Q9JJK5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
Herpud1Q9JJK5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Herpud1Q9JJK5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Herpud1Q9JJK5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Herpud1Q9JJK5 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.83■□□□□ 0.76
Herpud1Q9JJK5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herpud1Q9JJK5 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Herpud1Q9JJK5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Herpud1Q9JJK5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud1Q9JJK5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud1Q9JJK5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Herpud1Q9JJK5 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Herpud1Q9JJK5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud1Q9JJK5 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC19.8■□□□□ 0.76
Herpud1Q9JJK5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Herpud1Q9JJK5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Herpud1Q9JJK5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Herpud1Q9JJK5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 Zfp131-205ENSMUST00000223812 663 ntBASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Herpud1Q9JJK5 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud1Q9JJK5 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.78■□□□□ 0.76
Herpud1Q9JJK5 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Herpud1Q9JJK5 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 97.7 ms