Protein–RNA interactions for Protein: Q9EPE9

Atp13a1, Manganese-transporting ATPase 13A1, mousemouse

Known RBP Predictions only

Length 1,200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp13a1Q9EPE9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Atp13a1Q9EPE9 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC26.66■■□□□ 1.86
Atp13a1Q9EPE9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Atp13a1Q9EPE9 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Atp13a1Q9EPE9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
Atp13a1Q9EPE9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Atp13a1Q9EPE9 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.62■■□□□ 1.85
Atp13a1Q9EPE9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC26.61■■□□□ 1.85
Atp13a1Q9EPE9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Atp13a1Q9EPE9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC26.6■■□□□ 1.85
Atp13a1Q9EPE9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
Atp13a1Q9EPE9 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
Atp13a1Q9EPE9 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Atp13a1Q9EPE9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Atp13a1Q9EPE9 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Atp13a1Q9EPE9 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Atp13a1Q9EPE9 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Atp13a1Q9EPE9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Atp13a1Q9EPE9 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.58■■□□□ 1.85
Atp13a1Q9EPE9 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Atp13a1Q9EPE9 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.57■■□□□ 1.84
Atp13a1Q9EPE9 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
Atp13a1Q9EPE9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Atp13a1Q9EPE9 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Atp13a1Q9EPE9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
Atp13a1Q9EPE9 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.54■■□□□ 1.84
Atp13a1Q9EPE9 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Atp13a1Q9EPE9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Atp13a1Q9EPE9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
Atp13a1Q9EPE9 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Atp13a1Q9EPE9 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
Atp13a1Q9EPE9 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC26.51■■□□□ 1.83
Atp13a1Q9EPE9 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC26.51■■□□□ 1.83
Atp13a1Q9EPE9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
Atp13a1Q9EPE9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Atp13a1Q9EPE9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Atp13a1Q9EPE9 Zxda-201ENSMUST00000117281 2621 ntBASIC26.49■■□□□ 1.83
Atp13a1Q9EPE9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Atp13a1Q9EPE9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.47■■□□□ 1.83
Atp13a1Q9EPE9 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC26.47■■□□□ 1.83
Atp13a1Q9EPE9 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Atp13a1Q9EPE9 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC26.46■■□□□ 1.83
Atp13a1Q9EPE9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC26.46■■□□□ 1.83
Atp13a1Q9EPE9 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Atp13a1Q9EPE9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
Atp13a1Q9EPE9 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Atp13a1Q9EPE9 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Atp13a1Q9EPE9 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Atp13a1Q9EPE9 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Atp13a1Q9EPE9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Atp13a1Q9EPE9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC26.42■■□□□ 1.82
Atp13a1Q9EPE9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.41■■□□□ 1.82
Atp13a1Q9EPE9 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Atp13a1Q9EPE9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Atp13a1Q9EPE9 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC26.4■■□□□ 1.82
Atp13a1Q9EPE9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Atp13a1Q9EPE9 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC26.4■■□□□ 1.82
Atp13a1Q9EPE9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
Atp13a1Q9EPE9 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC26.39■■□□□ 1.82
Atp13a1Q9EPE9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.38■■□□□ 1.81
Atp13a1Q9EPE9 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
Atp13a1Q9EPE9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC26.37■■□□□ 1.81
Atp13a1Q9EPE9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Atp13a1Q9EPE9 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC26.36■■□□□ 1.81
Atp13a1Q9EPE9 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
Atp13a1Q9EPE9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp13a1Q9EPE9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp13a1Q9EPE9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Atp13a1Q9EPE9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
Atp13a1Q9EPE9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Atp13a1Q9EPE9 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
Atp13a1Q9EPE9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Atp13a1Q9EPE9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC26.32■■□□□ 1.8
Atp13a1Q9EPE9 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
Atp13a1Q9EPE9 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atp13a1Q9EPE9 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Atp13a1Q9EPE9 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC26.31■■□□□ 1.8
Atp13a1Q9EPE9 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC26.29■■□□□ 1.8
Atp13a1Q9EPE9 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Atp13a1Q9EPE9 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Atp13a1Q9EPE9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC26.29■■□□□ 1.8
Atp13a1Q9EPE9 Gm43445-201ENSMUST00000198564 2091 ntBASIC26.28■■□□□ 1.8
Atp13a1Q9EPE9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC26.28■■□□□ 1.8
Atp13a1Q9EPE9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Atp13a1Q9EPE9 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC26.27■■□□□ 1.8
Atp13a1Q9EPE9 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC26.27■■□□□ 1.8
Atp13a1Q9EPE9 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.27■■□□□ 1.8
Atp13a1Q9EPE9 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC26.27■■□□□ 1.8
Atp13a1Q9EPE9 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Atp13a1Q9EPE9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Atp13a1Q9EPE9 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp13a1Q9EPE9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Atp13a1Q9EPE9 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC26.24■■□□□ 1.79
Atp13a1Q9EPE9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC26.23■■□□□ 1.79
Atp13a1Q9EPE9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Atp13a1Q9EPE9 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Atp13a1Q9EPE9 Gm5987-201ENSMUST00000196433 1151 ntBASIC26.23■■□□□ 1.79
Atp13a1Q9EPE9 Gm30023-201ENSMUST00000197970 889 ntBASIC26.23■■□□□ 1.79
Atp13a1Q9EPE9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Atp13a1Q9EPE9 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC26.22■■□□□ 1.79
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms