Protein–RNA interactions for Protein: Q9CR78

Msantd3, Myb/SANT-like DNA-binding domain-containing protein 3, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msantd3Q9CR78 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Msantd3Q9CR78 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Msantd3Q9CR78 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Msantd3Q9CR78 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Msantd3Q9CR78 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Msantd3Q9CR78 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Msantd3Q9CR78 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Msantd3Q9CR78 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.43■■□□□ 1.34
Msantd3Q9CR78 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.42■■□□□ 1.34
Msantd3Q9CR78 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Msantd3Q9CR78 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.41■■□□□ 1.34
Msantd3Q9CR78 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Msantd3Q9CR78 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Msantd3Q9CR78 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Msantd3Q9CR78 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.4■■□□□ 1.34
Msantd3Q9CR78 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Msantd3Q9CR78 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Msantd3Q9CR78 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Msantd3Q9CR78 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Msantd3Q9CR78 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.37■■□□□ 1.33
Msantd3Q9CR78 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Msantd3Q9CR78 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Msantd3Q9CR78 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Msantd3Q9CR78 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.35■■□□□ 1.33
Msantd3Q9CR78 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Msantd3Q9CR78 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Msantd3Q9CR78 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msantd3Q9CR78 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Msantd3Q9CR78 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.33■■□□□ 1.33
Msantd3Q9CR78 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.33■■□□□ 1.32
Msantd3Q9CR78 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.32■■□□□ 1.32
Msantd3Q9CR78 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Msantd3Q9CR78 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Msantd3Q9CR78 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Msantd3Q9CR78 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Msantd3Q9CR78 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Msantd3Q9CR78 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.29■■□□□ 1.32
Msantd3Q9CR78 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Msantd3Q9CR78 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Msantd3Q9CR78 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.28■■□□□ 1.32
Msantd3Q9CR78 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.27■■□□□ 1.32
Msantd3Q9CR78 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Msantd3Q9CR78 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.24■■□□□ 1.31
Msantd3Q9CR78 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.24■■□□□ 1.31
Msantd3Q9CR78 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.24■■□□□ 1.31
Msantd3Q9CR78 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Msantd3Q9CR78 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Mir6538-201ENSMUST00000183713 110 ntBASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Msantd3Q9CR78 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Msantd3Q9CR78 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Msantd3Q9CR78 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Msantd3Q9CR78 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Msantd3Q9CR78 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.21■■□□□ 1.31
Msantd3Q9CR78 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Msantd3Q9CR78 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Msantd3Q9CR78 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Msantd3Q9CR78 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.18■■□□□ 1.3
Msantd3Q9CR78 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Msantd3Q9CR78 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.17■■□□□ 1.3
Msantd3Q9CR78 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
Msantd3Q9CR78 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Msantd3Q9CR78 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Msantd3Q9CR78 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Msantd3Q9CR78 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msantd3Q9CR78 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Msantd3Q9CR78 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Msantd3Q9CR78 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msantd3Q9CR78 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Msantd3Q9CR78 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Msantd3Q9CR78 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.14■■□□□ 1.29
Msantd3Q9CR78 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Msantd3Q9CR78 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.14■■□□□ 1.29
Msantd3Q9CR78 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.13■■□□□ 1.29
Msantd3Q9CR78 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Msantd3Q9CR78 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Msantd3Q9CR78 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Msantd3Q9CR78 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Msantd3Q9CR78 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Msantd3Q9CR78 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Msantd3Q9CR78 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Msantd3Q9CR78 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Msantd3Q9CR78 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Msantd3Q9CR78 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msantd3Q9CR78 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Msantd3Q9CR78 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Msantd3Q9CR78 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msantd3Q9CR78 Particl-201ENSMUST00000205370 1560 ntBASIC23.04■■□□□ 1.28
Msantd3Q9CR78 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msantd3Q9CR78 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Msantd3Q9CR78 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Msantd3Q9CR78 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.03■■□□□ 1.28
Msantd3Q9CR78 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msantd3Q9CR78 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Msantd3Q9CR78 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Msantd3Q9CR78 Gm11175-201ENSMUST00000116172 543 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms