Protein–RNA interactions for Protein: Q9CQK7

Rwdd1, RWD domain-containing protein 1, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rwdd1Q9CQK7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.35■■■□□ 2.61
Rwdd1Q9CQK7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC31.35■■■□□ 2.61
Rwdd1Q9CQK7 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
Rwdd1Q9CQK7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
Rwdd1Q9CQK7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
Rwdd1Q9CQK7 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Rwdd1Q9CQK7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rwdd1Q9CQK7 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Rwdd1Q9CQK7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
Rwdd1Q9CQK7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Rwdd1Q9CQK7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rwdd1Q9CQK7 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Rwdd1Q9CQK7 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rwdd1Q9CQK7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rwdd1Q9CQK7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Rwdd1Q9CQK7 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Rwdd1Q9CQK7 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Rwdd1Q9CQK7 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.27■■■□□ 2.6
Rwdd1Q9CQK7 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rwdd1Q9CQK7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC31.25■■■□□ 2.59
Rwdd1Q9CQK7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC31.24■■■□□ 2.59
Rwdd1Q9CQK7 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rwdd1Q9CQK7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Rwdd1Q9CQK7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
Rwdd1Q9CQK7 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Rwdd1Q9CQK7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC31.17■■■□□ 2.58
Rwdd1Q9CQK7 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC31.16■■■□□ 2.58
Rwdd1Q9CQK7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC31.16■■■□□ 2.58
Rwdd1Q9CQK7 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC31.16■■■□□ 2.58
Rwdd1Q9CQK7 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC31.15■■■□□ 2.58
Rwdd1Q9CQK7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC31.14■■■□□ 2.58
Rwdd1Q9CQK7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rwdd1Q9CQK7 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC31.14■■■□□ 2.58
Rwdd1Q9CQK7 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC31.13■■■□□ 2.57
Rwdd1Q9CQK7 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
Rwdd1Q9CQK7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC31.11■■■□□ 2.57
Rwdd1Q9CQK7 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
Rwdd1Q9CQK7 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rwdd1Q9CQK7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
Rwdd1Q9CQK7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC31.09■■■□□ 2.57
Rwdd1Q9CQK7 Zfp131-205ENSMUST00000223812 663 ntBASIC31.08■■■□□ 2.57
Rwdd1Q9CQK7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rwdd1Q9CQK7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
Rwdd1Q9CQK7 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC31.07■■■□□ 2.56
Rwdd1Q9CQK7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
Rwdd1Q9CQK7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rwdd1Q9CQK7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rwdd1Q9CQK7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
Rwdd1Q9CQK7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Rwdd1Q9CQK7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
Rwdd1Q9CQK7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
Rwdd1Q9CQK7 Gm43863-201ENSMUST00000203822 1192 ntBASIC31.05■■■□□ 2.56
Rwdd1Q9CQK7 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rwdd1Q9CQK7 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
Rwdd1Q9CQK7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
Rwdd1Q9CQK7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
Rwdd1Q9CQK7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC31.03■■■□□ 2.56
Rwdd1Q9CQK7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC31.01■■■□□ 2.55
Rwdd1Q9CQK7 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC31.01■■■□□ 2.55
Rwdd1Q9CQK7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
Rwdd1Q9CQK7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
Rwdd1Q9CQK7 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.98■■■□□ 2.55
Rwdd1Q9CQK7 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
Rwdd1Q9CQK7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
Rwdd1Q9CQK7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
Rwdd1Q9CQK7 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC30.95■■■□□ 2.54
Rwdd1Q9CQK7 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rwdd1Q9CQK7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rwdd1Q9CQK7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC30.94■■■□□ 2.54
Rwdd1Q9CQK7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
Rwdd1Q9CQK7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC30.94■■■□□ 2.54
Rwdd1Q9CQK7 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.93■■■□□ 2.54
Rwdd1Q9CQK7 Gm9397-201ENSMUST00000200125 605 ntBASIC30.93■■■□□ 2.54
Rwdd1Q9CQK7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.92■■■□□ 2.54
Rwdd1Q9CQK7 AC157572.2-201ENSMUST00000226970 908 ntBASIC30.92■■■□□ 2.54
Rwdd1Q9CQK7 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
Rwdd1Q9CQK7 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC30.91■■■□□ 2.54
Rwdd1Q9CQK7 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC30.91■■■□□ 2.54
Rwdd1Q9CQK7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC30.91■■■□□ 2.54
Rwdd1Q9CQK7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
Rwdd1Q9CQK7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rwdd1Q9CQK7 Tdp2-203ENSMUST00000223804 1136 ntBASIC30.89■■■□□ 2.54
Rwdd1Q9CQK7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
Rwdd1Q9CQK7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
Rwdd1Q9CQK7 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC30.87■■■□□ 2.53
Rwdd1Q9CQK7 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC30.86■■■□□ 2.53
Rwdd1Q9CQK7 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
Rwdd1Q9CQK7 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
Rwdd1Q9CQK7 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rwdd1Q9CQK7 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
Rwdd1Q9CQK7 Gm24970-201ENSMUST00000175582 82 ntBASIC30.85■■■□□ 2.53
Rwdd1Q9CQK7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC30.85■■■□□ 2.53
Rwdd1Q9CQK7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rwdd1Q9CQK7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
Rwdd1Q9CQK7 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rwdd1Q9CQK7 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC30.83■■■□□ 2.53
Rwdd1Q9CQK7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC30.83■■■□□ 2.53
Rwdd1Q9CQK7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.82■■■□□ 2.52
Rwdd1Q9CQK7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
Rwdd1Q9CQK7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms