Protein–RNA interactions for Protein: Q9CQE0

Rnf138, E3 ubiquitin-protein ligase RNF138, mousemouse

Known RBP Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138Q9CQE0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Rnf138Q9CQE0 Gm6821-201ENSMUST00000107540 542 ntBASIC23.37■■□□□ 1.33
Rnf138Q9CQE0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Rnf138Q9CQE0 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.37■■□□□ 1.33
Rnf138Q9CQE0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf138Q9CQE0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.36■■□□□ 1.33
Rnf138Q9CQE0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.36■■□□□ 1.33
Rnf138Q9CQE0 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rnf138Q9CQE0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf138Q9CQE0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rnf138Q9CQE0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.34■■□□□ 1.33
Rnf138Q9CQE0 Nkain2-201ENSMUST00000092602 558 ntBASIC23.34■■□□□ 1.33
Rnf138Q9CQE0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf138Q9CQE0 Zxda-201ENSMUST00000117281 2621 ntBASIC23.33■■□□□ 1.33
Rnf138Q9CQE0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Rnf138Q9CQE0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf138Q9CQE0 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Rnf138Q9CQE0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf138Q9CQE0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rnf138Q9CQE0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC23.32■■□□□ 1.32
Rnf138Q9CQE0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf138Q9CQE0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf138Q9CQE0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Rnf138Q9CQE0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rnf138Q9CQE0 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rnf138Q9CQE0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.3■■□□□ 1.32
Rnf138Q9CQE0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rnf138Q9CQE0 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138Q9CQE0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138Q9CQE0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Rnf138Q9CQE0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138Q9CQE0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rnf138Q9CQE0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.26■■□□□ 1.31
Rnf138Q9CQE0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rnf138Q9CQE0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Rnf138Q9CQE0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Rnf138Q9CQE0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.23■■□□□ 1.31
Rnf138Q9CQE0 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf138Q9CQE0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf138Q9CQE0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.22■■□□□ 1.31
Rnf138Q9CQE0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf138Q9CQE0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf138Q9CQE0 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf138Q9CQE0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf138Q9CQE0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf138Q9CQE0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf138Q9CQE0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf138Q9CQE0 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf138Q9CQE0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.19■■□□□ 1.3
Rnf138Q9CQE0 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Rnf138Q9CQE0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rnf138Q9CQE0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138Q9CQE0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf138Q9CQE0 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf138Q9CQE0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138Q9CQE0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138Q9CQE0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf138Q9CQE0 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.15■■□□□ 1.3
Rnf138Q9CQE0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rnf138Q9CQE0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf138Q9CQE0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Rnf138Q9CQE0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.13■■□□□ 1.29
Rnf138Q9CQE0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf138Q9CQE0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.12■■□□□ 1.29
Rnf138Q9CQE0 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf138Q9CQE0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf138Q9CQE0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf138Q9CQE0 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf138Q9CQE0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Rnf138Q9CQE0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Rnf138Q9CQE0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf138Q9CQE0 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rnf138Q9CQE0 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.09■■□□□ 1.29
Rnf138Q9CQE0 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.09■■□□□ 1.29
Rnf138Q9CQE0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf138Q9CQE0 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf138Q9CQE0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.07■■□□□ 1.28
Rnf138Q9CQE0 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.07■■□□□ 1.28
Rnf138Q9CQE0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf138Q9CQE0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.07■■□□□ 1.28
Rnf138Q9CQE0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Rnf138Q9CQE0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf138Q9CQE0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnf138Q9CQE0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Rnf138Q9CQE0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.04■■□□□ 1.28
Rnf138Q9CQE0 Gm30023-201ENSMUST00000197970 889 ntBASIC23.03■■□□□ 1.28
Rnf138Q9CQE0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf138Q9CQE0 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.02■■□□□ 1.28
Rnf138Q9CQE0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf138Q9CQE0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf138Q9CQE0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
Rnf138Q9CQE0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Rnf138Q9CQE0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf138Q9CQE0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf138Q9CQE0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.01■■□□□ 1.27
Rnf138Q9CQE0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf138Q9CQE0 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.01■■□□□ 1.27
Rnf138Q9CQE0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.01■■□□□ 1.27
Rnf138Q9CQE0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf138Q9CQE0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms