Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Cdh23Q99PF4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Cdh23Q99PF4 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Cdh23Q99PF4 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cdh23Q99PF4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Cdh23Q99PF4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC25.85■■□□□ 1.73
Cdh23Q99PF4 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Cdh23Q99PF4 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
Cdh23Q99PF4 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Cdh23Q99PF4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Cdh23Q99PF4 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Cdh23Q99PF4 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC25.84■■□□□ 1.73
Cdh23Q99PF4 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
Cdh23Q99PF4 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC25.83■■□□□ 1.73
Cdh23Q99PF4 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC25.83■■□□□ 1.73
Cdh23Q99PF4 Gm6311-201ENSMUST00000073790 878 ntBASIC25.83■■□□□ 1.73
Cdh23Q99PF4 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cdh23Q99PF4 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.82■■□□□ 1.72
Cdh23Q99PF4 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Cdh23Q99PF4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cdh23Q99PF4 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Cdh23Q99PF4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.79■■□□□ 1.72
Cdh23Q99PF4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Cdh23Q99PF4 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.78■■□□□ 1.72
Cdh23Q99PF4 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC25.78■■□□□ 1.72
Cdh23Q99PF4 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Cdh23Q99PF4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC25.78■■□□□ 1.72
Cdh23Q99PF4 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Cdh23Q99PF4 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Cdh23Q99PF4 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.76■■□□□ 1.72
Cdh23Q99PF4 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
Cdh23Q99PF4 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Cdh23Q99PF4 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC25.75■■□□□ 1.71
Cdh23Q99PF4 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
Cdh23Q99PF4 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
Cdh23Q99PF4 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cdh23Q99PF4 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC25.75■■□□□ 1.71
Cdh23Q99PF4 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Cdh23Q99PF4 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC25.74■■□□□ 1.71
Cdh23Q99PF4 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Cdh23Q99PF4 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Cdh23Q99PF4 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Cdh23Q99PF4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.71■■□□□ 1.71
Cdh23Q99PF4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Cdh23Q99PF4 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.7■■□□□ 1.71
Cdh23Q99PF4 AC167019.3-201ENSMUST00000228225 1266 ntBASIC25.7■■□□□ 1.71
Cdh23Q99PF4 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.71
Cdh23Q99PF4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Cdh23Q99PF4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Cdh23Q99PF4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Cdh23Q99PF4 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Gm12366-201ENSMUST00000121722 873 ntBASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Gm5786-201ENSMUST00000085368 882 ntBASIC25.68■■□□□ 1.7
Cdh23Q99PF4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.66■■□□□ 1.7
Cdh23Q99PF4 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Cdh23Q99PF4 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
Cdh23Q99PF4 AC131739.1-201ENSMUST00000221692 1245 ntBASIC25.65■■□□□ 1.7
Cdh23Q99PF4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
Cdh23Q99PF4 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Cdh23Q99PF4 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
Cdh23Q99PF4 Gm22567-201ENSMUST00000175542 342 ntBASIC25.62■■□□□ 1.69
Cdh23Q99PF4 Gm4799-201ENSMUST00000095396 657 ntBASIC25.62■■□□□ 1.69
Cdh23Q99PF4 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Cdh23Q99PF4 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.61■■□□□ 1.69
Cdh23Q99PF4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Cdh23Q99PF4 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdh23Q99PF4 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdh23Q99PF4 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdh23Q99PF4 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Cdh23Q99PF4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
Cdh23Q99PF4 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
Cdh23Q99PF4 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdh23Q99PF4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdh23Q99PF4 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cdh23Q99PF4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
Cdh23Q99PF4 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
Cdh23Q99PF4 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Cdh23Q99PF4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Cdh23Q99PF4 Gm2415-204ENSMUST00000190235 2004 ntBASIC25.54■■□□□ 1.68
Cdh23Q99PF4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.53■■□□□ 1.68
Cdh23Q99PF4 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.52■■□□□ 1.68
Cdh23Q99PF4 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdh23Q99PF4 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC25.52■■□□□ 1.68
Cdh23Q99PF4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Cdh23Q99PF4 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdh23Q99PF4 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
Cdh23Q99PF4 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.51■■□□□ 1.67
Cdh23Q99PF4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
Cdh23Q99PF4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Cdh23Q99PF4 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.48■■□□□ 1.67
Cdh23Q99PF4 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Cdh23Q99PF4 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cdh23Q99PF4 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cdh23Q99PF4 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Cdh23Q99PF4 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
Cdh23Q99PF4 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC25.46■■□□□ 1.67
Retrieved 100 of 76,532 protein–RNA pairs in 61.7 ms