Protein–RNA interactions for Protein: Q921M3

Sf3b3, Splicing factor 3B subunit 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b3Q921M3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC30.27■■■□□ 2.44
Sf3b3Q921M3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
Sf3b3Q921M3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC30.27■■■□□ 2.44
Sf3b3Q921M3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
Sf3b3Q921M3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC30.23■■■□□ 2.43
Sf3b3Q921M3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Sf3b3Q921M3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC30.22■■■□□ 2.43
Sf3b3Q921M3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Sf3b3Q921M3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC30.2■■■□□ 2.43
Sf3b3Q921M3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Sf3b3Q921M3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.2■■■□□ 2.43
Sf3b3Q921M3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC30.2■■■□□ 2.43
Sf3b3Q921M3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC30.2■■■□□ 2.43
Sf3b3Q921M3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
Sf3b3Q921M3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Sf3b3Q921M3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.18■■■□□ 2.42
Sf3b3Q921M3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.17■■■□□ 2.42
Sf3b3Q921M3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Sf3b3Q921M3 Gm11599-201ENSMUST00000118720 878 ntBASIC30.15■■■□□ 2.42
Sf3b3Q921M3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
Sf3b3Q921M3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Sf3b3Q921M3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Sf3b3Q921M3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.14■■■□□ 2.41
Sf3b3Q921M3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Sf3b3Q921M3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC30.13■■■□□ 2.41
Sf3b3Q921M3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC30.12■■■□□ 2.41
Sf3b3Q921M3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
Sf3b3Q921M3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.11■■■□□ 2.41
Sf3b3Q921M3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC30.1■■■□□ 2.41
Sf3b3Q921M3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Sf3b3Q921M3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Sf3b3Q921M3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Sf3b3Q921M3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Sf3b3Q921M3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Sf3b3Q921M3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Sf3b3Q921M3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
Sf3b3Q921M3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Sf3b3Q921M3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC30.04■■■□□ 2.4
Sf3b3Q921M3 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC30.04■■■□□ 2.4
Sf3b3Q921M3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
Sf3b3Q921M3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.03■■■□□ 2.4
Sf3b3Q921M3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Sf3b3Q921M3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
Sf3b3Q921M3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
Sf3b3Q921M3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
Sf3b3Q921M3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC30.01■■■□□ 2.39
Sf3b3Q921M3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30■■■□□ 2.39
Sf3b3Q921M3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sf3b3Q921M3 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC29.98■■■□□ 2.39
Sf3b3Q921M3 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Sf3b3Q921M3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
Sf3b3Q921M3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC29.96■■■□□ 2.39
Sf3b3Q921M3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Sf3b3Q921M3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Sf3b3Q921M3 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC29.93■■■□□ 2.38
Sf3b3Q921M3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Sf3b3Q921M3 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.93■■■□□ 2.38
Sf3b3Q921M3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Sf3b3Q921M3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Sf3b3Q921M3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC29.92■■■□□ 2.38
Sf3b3Q921M3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Sf3b3Q921M3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.91■■■□□ 2.38
Sf3b3Q921M3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Sf3b3Q921M3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.89■■■□□ 2.38
Sf3b3Q921M3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
Sf3b3Q921M3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC29.87■■■□□ 2.37
Sf3b3Q921M3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Sf3b3Q921M3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Sf3b3Q921M3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Sf3b3Q921M3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.85■■■□□ 2.37
Sf3b3Q921M3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
Sf3b3Q921M3 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Sf3b3Q921M3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
Sf3b3Q921M3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Sf3b3Q921M3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.83■■■□□ 2.37
Sf3b3Q921M3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Sf3b3Q921M3 Gm30023-201ENSMUST00000197970 889 ntBASIC29.83■■■□□ 2.37
Sf3b3Q921M3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC29.83■■■□□ 2.37
Sf3b3Q921M3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
Sf3b3Q921M3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
Sf3b3Q921M3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Sf3b3Q921M3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC29.81■■■□□ 2.36
Sf3b3Q921M3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.8■■■□□ 2.36
Sf3b3Q921M3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.79■■■□□ 2.36
Sf3b3Q921M3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC29.78■■■□□ 2.36
Sf3b3Q921M3 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Sf3b3Q921M3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Sf3b3Q921M3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC29.77■■■□□ 2.36
Sf3b3Q921M3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Sf3b3Q921M3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Sf3b3Q921M3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Sf3b3Q921M3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Sf3b3Q921M3 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
Sf3b3Q921M3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC29.73■■■□□ 2.35
Sf3b3Q921M3 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Sf3b3Q921M3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
Sf3b3Q921M3 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.72■■■□□ 2.35
Sf3b3Q921M3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
Sf3b3Q921M3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
Sf3b3Q921M3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms