Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC29.3■■■□□ 2.28
Pcdhb5Q91XZ5 Gm6345-201ENSMUST00000180378 1691 ntBASIC29.3■■■□□ 2.28
Pcdhb5Q91XZ5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
Pcdhb5Q91XZ5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
Pcdhb5Q91XZ5 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC29.27■■■□□ 2.28
Pcdhb5Q91XZ5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.28
Pcdhb5Q91XZ5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Pcdhb5Q91XZ5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.26■■■□□ 2.27
Pcdhb5Q91XZ5 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
Pcdhb5Q91XZ5 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
Pcdhb5Q91XZ5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
Pcdhb5Q91XZ5 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
Pcdhb5Q91XZ5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Pcdhb5Q91XZ5 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC29.23■■■□□ 2.27
Pcdhb5Q91XZ5 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC29.22■■■□□ 2.27
Pcdhb5Q91XZ5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.22■■■□□ 2.27
Pcdhb5Q91XZ5 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
Pcdhb5Q91XZ5 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Pcdhb5Q91XZ5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC29.2■■■□□ 2.27
Pcdhb5Q91XZ5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.19■■■□□ 2.26
Pcdhb5Q91XZ5 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pcdhb5Q91XZ5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Pcdhb5Q91XZ5 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC29.18■■■□□ 2.26
Pcdhb5Q91XZ5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.18■■■□□ 2.26
Pcdhb5Q91XZ5 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC29.16■■■□□ 2.26
Pcdhb5Q91XZ5 Gm11599-201ENSMUST00000118720 878 ntBASIC29.15■■■□□ 2.26
Pcdhb5Q91XZ5 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC29.15■■■□□ 2.26
Pcdhb5Q91XZ5 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC29.15■■■□□ 2.26
Pcdhb5Q91XZ5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pcdhb5Q91XZ5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdhb5Q91XZ5 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Pcdhb5Q91XZ5 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhb5Q91XZ5 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.13■■■□□ 2.25
Pcdhb5Q91XZ5 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhb5Q91XZ5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pcdhb5Q91XZ5 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pcdhb5Q91XZ5 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC29.12■■■□□ 2.25
Pcdhb5Q91XZ5 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC29.12■■■□□ 2.25
Pcdhb5Q91XZ5 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Pcdhb5Q91XZ5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
Pcdhb5Q91XZ5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.07■■■□□ 2.24
Pcdhb5Q91XZ5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.06■■■□□ 2.24
Pcdhb5Q91XZ5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.06■■■□□ 2.24
Pcdhb5Q91XZ5 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.05■■■□□ 2.24
Pcdhb5Q91XZ5 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC29.05■■■□□ 2.24
Pcdhb5Q91XZ5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.05■■■□□ 2.24
Pcdhb5Q91XZ5 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Pcdhb5Q91XZ5 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC29.03■■■□□ 2.24
Pcdhb5Q91XZ5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.02■■■□□ 2.24
Pcdhb5Q91XZ5 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdhb5Q91XZ5 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.23
Pcdhb5Q91XZ5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29■■■□□ 2.23
Pcdhb5Q91XZ5 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
Pcdhb5Q91XZ5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29■■■□□ 2.23
Pcdhb5Q91XZ5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Pcdhb5Q91XZ5 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC28.99■■■□□ 2.23
Pcdhb5Q91XZ5 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC28.99■■■□□ 2.23
Pcdhb5Q91XZ5 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.98■■■□□ 2.23
Pcdhb5Q91XZ5 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
Pcdhb5Q91XZ5 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdhb5Q91XZ5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Pcdhb5Q91XZ5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.96■■■□□ 2.23
Pcdhb5Q91XZ5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Pcdhb5Q91XZ5 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.95■■■□□ 2.22
Pcdhb5Q91XZ5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhb5Q91XZ5 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
Pcdhb5Q91XZ5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC28.93■■■□□ 2.22
Pcdhb5Q91XZ5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC28.92■■■□□ 2.22
Pcdhb5Q91XZ5 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC28.92■■■□□ 2.22
Pcdhb5Q91XZ5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Pcdhb5Q91XZ5 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhb5Q91XZ5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Pcdhb5Q91XZ5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC28.9■■■□□ 2.22
Pcdhb5Q91XZ5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.21
Pcdhb5Q91XZ5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.88■■■□□ 2.21
Pcdhb5Q91XZ5 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC28.88■■■□□ 2.21
Pcdhb5Q91XZ5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC28.88■■■□□ 2.21
Pcdhb5Q91XZ5 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC28.88■■■□□ 2.21
Pcdhb5Q91XZ5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
Pcdhb5Q91XZ5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Pcdhb5Q91XZ5 Gm30023-201ENSMUST00000197970 889 ntBASIC28.85■■■□□ 2.21
Pcdhb5Q91XZ5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.85■■■□□ 2.21
Pcdhb5Q91XZ5 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.85■■■□□ 2.21
Pcdhb5Q91XZ5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
Pcdhb5Q91XZ5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhb5Q91XZ5 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Pcdhb5Q91XZ5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC28.84■■■□□ 2.21
Pcdhb5Q91XZ5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.83■■■□□ 2.21
Pcdhb5Q91XZ5 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhb5Q91XZ5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhb5Q91XZ5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Pcdhb5Q91XZ5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC28.81■■■□□ 2.2
Pcdhb5Q91XZ5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
Pcdhb5Q91XZ5 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
Pcdhb5Q91XZ5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Pcdhb5Q91XZ5 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdhb5Q91XZ5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pcdhb5Q91XZ5 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.78■■■□□ 2.2
Pcdhb5Q91XZ5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC28.78■■■□□ 2.2
Pcdhb5Q91XZ5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.78■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms