Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhga3Q91XY5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Pcdhga3Q91XY5 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga3Q91XY5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
Pcdhga3Q91XY5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga3Q91XY5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga3Q91XY5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Pcdhga3Q91XY5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
Pcdhga3Q91XY5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Pcdhga3Q91XY5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Pcdhga3Q91XY5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
Pcdhga3Q91XY5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga3Q91XY5 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Pcdhga3Q91XY5 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC21.35■■□□□ 1.01
Pcdhga3Q91XY5 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC21.34■■□□□ 1.01
Pcdhga3Q91XY5 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.34■■□□□ 1.01
Pcdhga3Q91XY5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Pcdhga3Q91XY5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Pcdhga3Q91XY5 Gm45855-201ENSMUST00000212546 880 ntBASIC21.33■■□□□ 1.01
Pcdhga3Q91XY5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Pcdhga3Q91XY5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
Pcdhga3Q91XY5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhga3Q91XY5 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga3Q91XY5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21.32■■□□□ 1
Pcdhga3Q91XY5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Pcdhga3Q91XY5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Pcdhga3Q91XY5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC21.31■■□□□ 1
Pcdhga3Q91XY5 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga3Q91XY5 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Pcdhga3Q91XY5 Gm24970-201ENSMUST00000175582 82 ntBASIC21.31■■□□□ 1
Pcdhga3Q91XY5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.31■■□□□ 1
Pcdhga3Q91XY5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.3■■□□□ 1
Pcdhga3Q91XY5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga3Q91XY5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.29■■□□□ 1
Pcdhga3Q91XY5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhga3Q91XY5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhga3Q91XY5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Pcdhga3Q91XY5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhga3Q91XY5 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhga3Q91XY5 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhga3Q91XY5 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.25■□□□□ 0.99
Pcdhga3Q91XY5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga3Q91XY5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga3Q91XY5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhga3Q91XY5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga3Q91XY5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga3Q91XY5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhga3Q91XY5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhga3Q91XY5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhga3Q91XY5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhga3Q91XY5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.22■□□□□ 0.99
Pcdhga3Q91XY5 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.22■□□□□ 0.99
Pcdhga3Q91XY5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga3Q91XY5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhga3Q91XY5 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Pcdhga3Q91XY5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhga3Q91XY5 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga3Q91XY5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga3Q91XY5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.19■□□□□ 0.98
Pcdhga3Q91XY5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdhga3Q91XY5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga3Q91XY5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC21.18■□□□□ 0.98
Pcdhga3Q91XY5 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga3Q91XY5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdhga3Q91XY5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga3Q91XY5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdhga3Q91XY5 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga3Q91XY5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga3Q91XY5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga3Q91XY5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga3Q91XY5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga3Q91XY5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdhga3Q91XY5 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
Pcdhga3Q91XY5 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
Pcdhga3Q91XY5 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdhga3Q91XY5 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC21.14■□□□□ 0.97
Pcdhga3Q91XY5 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdhga3Q91XY5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdhga3Q91XY5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Pcdhga3Q91XY5 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdhga3Q91XY5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga3Q91XY5 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga3Q91XY5 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga3Q91XY5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdhga3Q91XY5 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdhga3Q91XY5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdhga3Q91XY5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga3Q91XY5 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga3Q91XY5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdhga3Q91XY5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC21.09■□□□□ 0.97
Pcdhga3Q91XY5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdhga3Q91XY5 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.08■□□□□ 0.97
Pcdhga3Q91XY5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdhga3Q91XY5 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms