Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Ddx1Q91VR5 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx1Q91VR5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx1Q91VR5 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC25.4■■□□□ 1.66
Ddx1Q91VR5 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Ddx1Q91VR5 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
Ddx1Q91VR5 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx1Q91VR5 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.38■■□□□ 1.65
Ddx1Q91VR5 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Ddx1Q91VR5 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx1Q91VR5 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Ddx1Q91VR5 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.35■■□□□ 1.65
Ddx1Q91VR5 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC25.35■■□□□ 1.65
Ddx1Q91VR5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Ddx1Q91VR5 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx1Q91VR5 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
Ddx1Q91VR5 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Ddx1Q91VR5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx1Q91VR5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Ddx1Q91VR5 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.3■■□□□ 1.64
Ddx1Q91VR5 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.3■■□□□ 1.64
Ddx1Q91VR5 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx1Q91VR5 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Ddx1Q91VR5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Ddx1Q91VR5 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.28■■□□□ 1.64
Ddx1Q91VR5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Ddx1Q91VR5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx1Q91VR5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Ddx1Q91VR5 Gm6821-201ENSMUST00000107540 542 ntBASIC25.26■■□□□ 1.63
Ddx1Q91VR5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Ddx1Q91VR5 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx1Q91VR5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Ddx1Q91VR5 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx1Q91VR5 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Ddx1Q91VR5 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx1Q91VR5 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Ddx1Q91VR5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Ddx1Q91VR5 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC25.21■■□□□ 1.63
Ddx1Q91VR5 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.63
Ddx1Q91VR5 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx1Q91VR5 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Ddx1Q91VR5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Ddx1Q91VR5 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx1Q91VR5 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Ddx1Q91VR5 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
Ddx1Q91VR5 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Ddx1Q91VR5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC25.17■■□□□ 1.62
Ddx1Q91VR5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Ddx1Q91VR5 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx1Q91VR5 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx1Q91VR5 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx1Q91VR5 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Ddx1Q91VR5 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx1Q91VR5 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC25.14■■□□□ 1.62
Ddx1Q91VR5 Fezf2-202ENSMUST00000224023 1917 ntBASIC25.14■■□□□ 1.62
Ddx1Q91VR5 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
Ddx1Q91VR5 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.61
Ddx1Q91VR5 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx1Q91VR5 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Ddx1Q91VR5 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC25.11■■□□□ 1.61
Ddx1Q91VR5 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
Ddx1Q91VR5 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ddx1Q91VR5 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
Ddx1Q91VR5 Gm43863-201ENSMUST00000203822 1192 ntBASIC25.09■■□□□ 1.61
Ddx1Q91VR5 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC25.08■■□□□ 1.61
Ddx1Q91VR5 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx1Q91VR5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ddx1Q91VR5 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ddx1Q91VR5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ddx1Q91VR5 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC25.05■■□□□ 1.6
Ddx1Q91VR5 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.04■■□□□ 1.6
Ddx1Q91VR5 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ddx1Q91VR5 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx1Q91VR5 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC25.02■■□□□ 1.6
Ddx1Q91VR5 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ddx1Q91VR5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx1Q91VR5 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
Ddx1Q91VR5 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.99■■□□□ 1.59
Ddx1Q91VR5 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
Ddx1Q91VR5 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx1Q91VR5 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
Ddx1Q91VR5 AC157572.2-201ENSMUST00000226970 908 ntBASIC24.97■■□□□ 1.59
Ddx1Q91VR5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
Ddx1Q91VR5 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx1Q91VR5 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx1Q91VR5 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
Ddx1Q91VR5 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx1Q91VR5 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx1Q91VR5 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx1Q91VR5 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx1Q91VR5 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC24.9■■□□□ 1.58
Ddx1Q91VR5 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx1Q91VR5 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
Ddx1Q91VR5 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 151.2 ms