Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkd2Q8VE28 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkd2Q8VE28 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkd2Q8VE28 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Nkd2Q8VE28 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkd2Q8VE28 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkd2Q8VE28 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Nkd2Q8VE28 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Nkd2Q8VE28 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Nkd2Q8VE28 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.9■■□□□ 1.1
Nkd2Q8VE28 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Nkd2Q8VE28 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nkd2Q8VE28 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Nkd2Q8VE28 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Nkd2Q8VE28 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Nkd2Q8VE28 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.88■■□□□ 1.09
Nkd2Q8VE28 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Nkd2Q8VE28 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Nkd2Q8VE28 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
Nkd2Q8VE28 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC21.87■■□□□ 1.09
Nkd2Q8VE28 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Nkd2Q8VE28 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Nkd2Q8VE28 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Nkd2Q8VE28 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Nkd2Q8VE28 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.84■■□□□ 1.09
Nkd2Q8VE28 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkd2Q8VE28 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Nkd2Q8VE28 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
Nkd2Q8VE28 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Nkd2Q8VE28 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.09
Nkd2Q8VE28 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
Nkd2Q8VE28 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Nkd2Q8VE28 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Nkd2Q8VE28 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
Nkd2Q8VE28 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkd2Q8VE28 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkd2Q8VE28 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Nkd2Q8VE28 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.8■■□□□ 1.08
Nkd2Q8VE28 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkd2Q8VE28 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Nkd2Q8VE28 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkd2Q8VE28 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Nkd2Q8VE28 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.79■■□□□ 1.08
Nkd2Q8VE28 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Nkd2Q8VE28 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nkd2Q8VE28 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Nkd2Q8VE28 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Nkd2Q8VE28 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.77■■□□□ 1.08
Nkd2Q8VE28 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nkd2Q8VE28 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Nkd2Q8VE28 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Nkd2Q8VE28 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Nkd2Q8VE28 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Nkd2Q8VE28 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkd2Q8VE28 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Nkd2Q8VE28 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Nkd2Q8VE28 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Nkd2Q8VE28 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC21.74■■□□□ 1.07
Nkd2Q8VE28 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkd2Q8VE28 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Nkd2Q8VE28 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkd2Q8VE28 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC21.73■■□□□ 1.07
Nkd2Q8VE28 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nkd2Q8VE28 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Nkd2Q8VE28 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Nkd2Q8VE28 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Gm42809-201ENSMUST00000198429 1138 ntBASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Nkd2Q8VE28 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Nkd2Q8VE28 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Nkd2Q8VE28 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.7■■□□□ 1.07
Nkd2Q8VE28 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Nkd2Q8VE28 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Nkd2Q8VE28 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.7■■□□□ 1.06
Nkd2Q8VE28 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Nkd2Q8VE28 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.69■■□□□ 1.06
Nkd2Q8VE28 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Nkd2Q8VE28 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Nkd2Q8VE28 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Nkd2Q8VE28 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Nkd2Q8VE28 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC21.68■■□□□ 1.06
Nkd2Q8VE28 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nkd2Q8VE28 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Nkd2Q8VE28 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Nkd2Q8VE28 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkd2Q8VE28 Nkain2-201ENSMUST00000092602 558 ntBASIC21.65■■□□□ 1.06
Nkd2Q8VE28 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.65■■□□□ 1.06
Nkd2Q8VE28 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Nkd2Q8VE28 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Nkd2Q8VE28 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.64■■□□□ 1.05
Nkd2Q8VE28 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Nkd2Q8VE28 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Nkd2Q8VE28 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Nkd2Q8VE28 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.62■■□□□ 1.05
Nkd2Q8VE28 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms