Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.91■■□□□ 1.26
Ndc1Q8VCB1 Gm6345-201ENSMUST00000180378 1691 ntBASIC22.9■■□□□ 1.26
Ndc1Q8VCB1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ndc1Q8VCB1 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ndc1Q8VCB1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ndc1Q8VCB1 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.89■■□□□ 1.26
Ndc1Q8VCB1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
Ndc1Q8VCB1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.88■■□□□ 1.25
Ndc1Q8VCB1 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
Ndc1Q8VCB1 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ndc1Q8VCB1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ndc1Q8VCB1 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Ndc1Q8VCB1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ndc1Q8VCB1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Ndc1Q8VCB1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.86■■□□□ 1.25
Ndc1Q8VCB1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC22.86■■□□□ 1.25
Ndc1Q8VCB1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.86■■□□□ 1.25
Ndc1Q8VCB1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
Ndc1Q8VCB1 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ndc1Q8VCB1 Gm5987-201ENSMUST00000196433 1151 ntBASIC22.85■■□□□ 1.25
Ndc1Q8VCB1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Ndc1Q8VCB1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Ndc1Q8VCB1 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ndc1Q8VCB1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.82■■□□□ 1.24
Ndc1Q8VCB1 Zxda-201ENSMUST00000117281 2621 ntBASIC22.82■■□□□ 1.24
Ndc1Q8VCB1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Ndc1Q8VCB1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC22.81■■□□□ 1.24
Ndc1Q8VCB1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.81■■□□□ 1.24
Ndc1Q8VCB1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ndc1Q8VCB1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
Ndc1Q8VCB1 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ndc1Q8VCB1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ndc1Q8VCB1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ndc1Q8VCB1 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Ndc1Q8VCB1 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ndc1Q8VCB1 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Ndc1Q8VCB1 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC22.78■■□□□ 1.24
Ndc1Q8VCB1 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Ndc1Q8VCB1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ndc1Q8VCB1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC22.77■■□□□ 1.24
Ndc1Q8VCB1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.77■■□□□ 1.24
Ndc1Q8VCB1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Ndc1Q8VCB1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Ndc1Q8VCB1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ndc1Q8VCB1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Ndc1Q8VCB1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ndc1Q8VCB1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Ndc1Q8VCB1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ndc1Q8VCB1 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC22.72■■□□□ 1.23
Ndc1Q8VCB1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ndc1Q8VCB1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Ndc1Q8VCB1 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ndc1Q8VCB1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Ndc1Q8VCB1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
Ndc1Q8VCB1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ndc1Q8VCB1 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ndc1Q8VCB1 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ndc1Q8VCB1 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Ndc1Q8VCB1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ndc1Q8VCB1 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.69■■□□□ 1.22
Ndc1Q8VCB1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.67■■□□□ 1.22
Ndc1Q8VCB1 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Ndc1Q8VCB1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC22.66■■□□□ 1.22
Ndc1Q8VCB1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ndc1Q8VCB1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ndc1Q8VCB1 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
Ndc1Q8VCB1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.64■■□□□ 1.21
Ndc1Q8VCB1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.64■■□□□ 1.21
Ndc1Q8VCB1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ndc1Q8VCB1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ndc1Q8VCB1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Ndc1Q8VCB1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
Ndc1Q8VCB1 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Ndc1Q8VCB1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ndc1Q8VCB1 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ndc1Q8VCB1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
Ndc1Q8VCB1 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ndc1Q8VCB1 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ndc1Q8VCB1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ndc1Q8VCB1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Ndc1Q8VCB1 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ndc1Q8VCB1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Ndc1Q8VCB1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.58■■□□□ 1.21
Ndc1Q8VCB1 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 Gm7432-201ENSMUST00000210343 879 ntBASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ndc1Q8VCB1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
Ndc1Q8VCB1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ndc1Q8VCB1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ndc1Q8VCB1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC22.56■■□□□ 1.2
Ndc1Q8VCB1 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ndc1Q8VCB1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
Ndc1Q8VCB1 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ndc1Q8VCB1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Ndc1Q8VCB1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Ndc1Q8VCB1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC22.55■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms