Protein–RNA interactions for Protein: Q8R2C9

Vmn1r28, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r28Q8R2C9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r28Q8R2C9 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Vmn1r28Q8R2C9 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Vmn1r28Q8R2C9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Vmn1r28Q8R2C9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Vmn1r28Q8R2C9 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Vmn1r28Q8R2C9 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.38■■□□□ 1.17
Vmn1r28Q8R2C9 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Vmn1r28Q8R2C9 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r28Q8R2C9 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
Vmn1r28Q8R2C9 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r28Q8R2C9 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Vmn1r28Q8R2C9 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Vmn1r28Q8R2C9 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r28Q8R2C9 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r28Q8R2C9 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Vmn1r28Q8R2C9 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r28Q8R2C9 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r28Q8R2C9 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC22.34■■□□□ 1.17
Vmn1r28Q8R2C9 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Vmn1r28Q8R2C9 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r28Q8R2C9 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r28Q8R2C9 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.33■■□□□ 1.17
Vmn1r28Q8R2C9 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Vmn1r28Q8R2C9 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r28Q8R2C9 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r28Q8R2C9 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r28Q8R2C9 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r28Q8R2C9 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Vmn1r28Q8R2C9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r28Q8R2C9 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r28Q8R2C9 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r28Q8R2C9 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Vmn1r28Q8R2C9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.31■■□□□ 1.16
Vmn1r28Q8R2C9 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r28Q8R2C9 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Vmn1r28Q8R2C9 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r28Q8R2C9 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r28Q8R2C9 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Vmn1r28Q8R2C9 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Vmn1r28Q8R2C9 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
Vmn1r28Q8R2C9 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Vmn1r28Q8R2C9 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.27■■□□□ 1.16
Vmn1r28Q8R2C9 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r28Q8R2C9 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Vmn1r28Q8R2C9 Gm9939-201ENSMUST00000067161 1154 ntBASIC22.26■■□□□ 1.15
Vmn1r28Q8R2C9 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r28Q8R2C9 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Vmn1r28Q8R2C9 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r28Q8R2C9 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r28Q8R2C9 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Vmn1r28Q8R2C9 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC22.25■■□□□ 1.15
Vmn1r28Q8R2C9 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Vmn1r28Q8R2C9 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Vmn1r28Q8R2C9 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r28Q8R2C9 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r28Q8R2C9 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Vmn1r28Q8R2C9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r28Q8R2C9 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Vmn1r28Q8R2C9 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Vmn1r28Q8R2C9 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Vmn1r28Q8R2C9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Vmn1r28Q8R2C9 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC22.2■■□□□ 1.14
Vmn1r28Q8R2C9 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r28Q8R2C9 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Vmn1r28Q8R2C9 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r28Q8R2C9 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r28Q8R2C9 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Vmn1r28Q8R2C9 Gm6821-201ENSMUST00000107540 542 ntBASIC22.17■■□□□ 1.14
Vmn1r28Q8R2C9 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
Vmn1r28Q8R2C9 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.17■■□□□ 1.14
Vmn1r28Q8R2C9 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Vmn1r28Q8R2C9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC22.16■■□□□ 1.14
Vmn1r28Q8R2C9 Amer2-203ENSMUST00000225247 2662 ntBASIC22.15■■□□□ 1.14
Vmn1r28Q8R2C9 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Vmn1r28Q8R2C9 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
Vmn1r28Q8R2C9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
Vmn1r28Q8R2C9 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.13■■□□□ 1.13
Vmn1r28Q8R2C9 Nkain2-201ENSMUST00000092602 558 ntBASIC22.13■■□□□ 1.13
Vmn1r28Q8R2C9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Vmn1r28Q8R2C9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
Vmn1r28Q8R2C9 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Vmn1r28Q8R2C9 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC22.11■■□□□ 1.13
Vmn1r28Q8R2C9 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r28Q8R2C9 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r28Q8R2C9 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Vmn1r28Q8R2C9 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.1■■□□□ 1.13
Vmn1r28Q8R2C9 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Vmn1r28Q8R2C9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r28Q8R2C9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Vmn1r28Q8R2C9 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.09■■□□□ 1.13
Vmn1r28Q8R2C9 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Vmn1r28Q8R2C9 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Vmn1r28Q8R2C9 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC22.06■■□□□ 1.12
Vmn1r28Q8R2C9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.05■■□□□ 1.12
Vmn1r28Q8R2C9 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
Vmn1r28Q8R2C9 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC22.05■■□□□ 1.12
Vmn1r28Q8R2C9 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Vmn1r28Q8R2C9 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Vmn1r28Q8R2C9 Gm8503-201ENSMUST00000118131 455 ntBASIC22.04■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms