Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC15.42■□□□□ 0.06
Smim29Q8R043 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smim29Q8R043 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim29Q8R043 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smim29Q8R043 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
Smim29Q8R043 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smim29Q8R043 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Smim29Q8R043 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
Smim29Q8R043 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
Smim29Q8R043 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Smim29Q8R043 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim29Q8R043 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Smim29Q8R043 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC15.39■□□□□ 0.05
Smim29Q8R043 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim29Q8R043 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim29Q8R043 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Smim29Q8R043 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Smim29Q8R043 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Smim29Q8R043 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Smim29Q8R043 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
Smim29Q8R043 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Smim29Q8R043 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Smim29Q8R043 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Smim29Q8R043 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Smim29Q8R043 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Smim29Q8R043 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Smim29Q8R043 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim29Q8R043 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Smim29Q8R043 Pcf11-205ENSMUST00000208255 1720 ntBASIC15.33■□□□□ 0.04
Smim29Q8R043 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Smim29Q8R043 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC15.33■□□□□ 0.04
Smim29Q8R043 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Smim29Q8R043 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Smim29Q8R043 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Smim29Q8R043 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Smim29Q8R043 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Smim29Q8R043 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Smim29Q8R043 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Smim29Q8R043 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Smim29Q8R043 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Smim29Q8R043 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim29Q8R043 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim29Q8R043 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Smim29Q8R043 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Smim29Q8R043 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC15.26■□□□□ 0.03
Smim29Q8R043 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim29Q8R043 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim29Q8R043 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Smim29Q8R043 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Smim29Q8R043 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC15.25■□□□□ 0.03
Smim29Q8R043 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim29Q8R043 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Smim29Q8R043 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC15.25■□□□□ 0.03
Smim29Q8R043 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Smim29Q8R043 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC15.25■□□□□ 0.03
Smim29Q8R043 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim29Q8R043 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC15.24■□□□□ 0.03
Smim29Q8R043 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Smim29Q8R043 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Smim29Q8R043 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim29Q8R043 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim29Q8R043 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Smim29Q8R043 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim29Q8R043 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Smim29Q8R043 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Smim29Q8R043 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Smim29Q8R043 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Smim29Q8R043 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Smim29Q8R043 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim29Q8R043 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim29Q8R043 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Smim29Q8R043 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Smim29Q8R043 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC15.19■□□□□ 0.02
Smim29Q8R043 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Smim29Q8R043 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Smim29Q8R043 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 258.6 ms