Protein–RNA interactions for Protein: Q8JZK6

Trim61, MCG22896, isoform CRA_b, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim61Q8JZK6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
Trim61Q8JZK6 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC25.8■■□□□ 1.72
Trim61Q8JZK6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trim61Q8JZK6 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC25.79■■□□□ 1.72
Trim61Q8JZK6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Trim61Q8JZK6 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trim61Q8JZK6 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Trim61Q8JZK6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC25.78■■□□□ 1.72
Trim61Q8JZK6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trim61Q8JZK6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trim61Q8JZK6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.75■■□□□ 1.71
Trim61Q8JZK6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.75■■□□□ 1.71
Trim61Q8JZK6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trim61Q8JZK6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim61Q8JZK6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Trim61Q8JZK6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Trim61Q8JZK6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.72■■□□□ 1.71
Trim61Q8JZK6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Trim61Q8JZK6 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Trim61Q8JZK6 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim61Q8JZK6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trim61Q8JZK6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.68■■□□□ 1.7
Trim61Q8JZK6 Zxda-201ENSMUST00000117281 2621 ntBASIC25.67■■□□□ 1.7
Trim61Q8JZK6 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim61Q8JZK6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trim61Q8JZK6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.67■■□□□ 1.7
Trim61Q8JZK6 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
Trim61Q8JZK6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trim61Q8JZK6 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trim61Q8JZK6 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
Trim61Q8JZK6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim61Q8JZK6 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
Trim61Q8JZK6 Gm11599-201ENSMUST00000118720 878 ntBASIC25.64■■□□□ 1.7
Trim61Q8JZK6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trim61Q8JZK6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
Trim61Q8JZK6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.63■■□□□ 1.69
Trim61Q8JZK6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
Trim61Q8JZK6 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC25.62■■□□□ 1.69
Trim61Q8JZK6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
Trim61Q8JZK6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim61Q8JZK6 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC25.61■■□□□ 1.69
Trim61Q8JZK6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.61■■□□□ 1.69
Trim61Q8JZK6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim61Q8JZK6 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
Trim61Q8JZK6 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC25.6■■□□□ 1.69
Trim61Q8JZK6 Gm6206-201ENSMUST00000133472 2199 ntBASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Gm6345-201ENSMUST00000180378 1691 ntBASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Trim61Q8JZK6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
Trim61Q8JZK6 Gm9905-201ENSMUST00000065740 1845 ntBASIC25.58■■□□□ 1.68
Trim61Q8JZK6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Trim61Q8JZK6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.57■■□□□ 1.68
Trim61Q8JZK6 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Trim61Q8JZK6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.56■■□□□ 1.68
Trim61Q8JZK6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.55■■□□□ 1.68
Trim61Q8JZK6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
Trim61Q8JZK6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim61Q8JZK6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
Trim61Q8JZK6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim61Q8JZK6 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
Trim61Q8JZK6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
Trim61Q8JZK6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Trim61Q8JZK6 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC25.5■■□□□ 1.67
Trim61Q8JZK6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Trim61Q8JZK6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Trim61Q8JZK6 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
Trim61Q8JZK6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Trim61Q8JZK6 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC25.46■■□□□ 1.67
Trim61Q8JZK6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
Trim61Q8JZK6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC25.44■■□□□ 1.66
Trim61Q8JZK6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.44■■□□□ 1.66
Trim61Q8JZK6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim61Q8JZK6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC25.44■■□□□ 1.66
Trim61Q8JZK6 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Trim61Q8JZK6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Trim61Q8JZK6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim61Q8JZK6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
Trim61Q8JZK6 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim61Q8JZK6 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC25.43■■□□□ 1.66
Trim61Q8JZK6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Trim61Q8JZK6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC25.43■■□□□ 1.66
Trim61Q8JZK6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim61Q8JZK6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC25.42■■□□□ 1.66
Trim61Q8JZK6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Trim61Q8JZK6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Trim61Q8JZK6 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC25.41■■□□□ 1.66
Trim61Q8JZK6 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Trim61Q8JZK6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.39■■□□□ 1.66
Trim61Q8JZK6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Trim61Q8JZK6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Trim61Q8JZK6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC25.37■■□□□ 1.65
Trim61Q8JZK6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim61Q8JZK6 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Trim61Q8JZK6 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC25.36■■□□□ 1.65
Trim61Q8JZK6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Trim61Q8JZK6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms