Protein–RNA interactions for Protein: Q8CG48

Smc2, Structural maintenance of chromosomes protein 2, mousemouse

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc2Q8CG48 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Smc2Q8CG48 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Smc2Q8CG48 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Smc2Q8CG48 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Smc2Q8CG48 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Smc2Q8CG48 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
Smc2Q8CG48 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC27.75■■■□□ 2.03
Smc2Q8CG48 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Smc2Q8CG48 Tdp2-203ENSMUST00000223804 1136 ntBASIC27.74■■■□□ 2.03
Smc2Q8CG48 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Smc2Q8CG48 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.72■■■□□ 2.03
Smc2Q8CG48 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC27.72■■■□□ 2.03
Smc2Q8CG48 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC27.72■■■□□ 2.03
Smc2Q8CG48 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC27.72■■■□□ 2.03
Smc2Q8CG48 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC27.72■■■□□ 2.03
Smc2Q8CG48 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Smc2Q8CG48 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC27.71■■■□□ 2.03
Smc2Q8CG48 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
Smc2Q8CG48 Gm43863-201ENSMUST00000203822 1192 ntBASIC27.69■■■□□ 2.02
Smc2Q8CG48 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC27.68■■■□□ 2.02
Smc2Q8CG48 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Smc2Q8CG48 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC27.68■■■□□ 2.02
Smc2Q8CG48 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Smc2Q8CG48 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Smc2Q8CG48 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Smc2Q8CG48 Gm9397-201ENSMUST00000200125 605 ntBASIC27.64■■■□□ 2.02
Smc2Q8CG48 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Smc2Q8CG48 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Smc2Q8CG48 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
Smc2Q8CG48 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Smc2Q8CG48 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Smc2Q8CG48 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
Smc2Q8CG48 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC27.61■■■□□ 2.01
Smc2Q8CG48 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.61■■■□□ 2.01
Smc2Q8CG48 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
Smc2Q8CG48 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Smc2Q8CG48 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Smc2Q8CG48 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Smc2Q8CG48 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc2Q8CG48 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc2Q8CG48 AC157572.2-201ENSMUST00000226970 908 ntBASIC27.59■■■□□ 2.01
Smc2Q8CG48 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc2Q8CG48 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc2Q8CG48 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
Smc2Q8CG48 Gm24970-201ENSMUST00000175582 82 ntBASIC27.58■■■□□ 2.01
Smc2Q8CG48 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC27.58■■■□□ 2.01
Smc2Q8CG48 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Smc2Q8CG48 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Smc2Q8CG48 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC27.57■■■□□ 2
Smc2Q8CG48 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC27.57■■■□□ 2
Smc2Q8CG48 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Smc2Q8CG48 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
Smc2Q8CG48 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC27.56■■■□□ 2
Smc2Q8CG48 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.56■■■□□ 2
Smc2Q8CG48 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC27.56■■■□□ 2
Smc2Q8CG48 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC27.56■■■□□ 2
Smc2Q8CG48 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC27.55■■■□□ 2
Smc2Q8CG48 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Smc2Q8CG48 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.54■■■□□ 2
Smc2Q8CG48 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC27.54■■■□□ 2
Smc2Q8CG48 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.53■■■□□ 2
Smc2Q8CG48 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Smc2Q8CG48 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Smc2Q8CG48 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Smc2Q8CG48 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Smc2Q8CG48 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC27.49■■□□□ 1.99
Smc2Q8CG48 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc2Q8CG48 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Smc2Q8CG48 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC27.49■■□□□ 1.99
Smc2Q8CG48 Gm45855-201ENSMUST00000212546 880 ntBASIC27.49■■□□□ 1.99
Smc2Q8CG48 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Smc2Q8CG48 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
Smc2Q8CG48 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Smc2Q8CG48 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC27.42■■□□□ 1.98
Smc2Q8CG48 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Smc2Q8CG48 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Smc2Q8CG48 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Smc2Q8CG48 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC27.41■■□□□ 1.98
Smc2Q8CG48 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Smc2Q8CG48 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC27.41■■□□□ 1.98
Smc2Q8CG48 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Smc2Q8CG48 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Smc2Q8CG48 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC27.39■■□□□ 1.98
Smc2Q8CG48 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.97
Smc2Q8CG48 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc2Q8CG48 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc2Q8CG48 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc2Q8CG48 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Smc2Q8CG48 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc2Q8CG48 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC27.37■■□□□ 1.97
Smc2Q8CG48 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Smc2Q8CG48 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Smc2Q8CG48 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Smc2Q8CG48 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Smc2Q8CG48 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Smc2Q8CG48 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
Smc2Q8CG48 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
Smc2Q8CG48 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.96
Smc2Q8CG48 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Smc2Q8CG48 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms