Protein–RNA interactions for Protein: Q8CFE3

Rcor1, REST corepressor 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rcor1Q8CFE3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rcor1Q8CFE3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Rcor1Q8CFE3 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Rcor1Q8CFE3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.36■■□□□ 1.33
Rcor1Q8CFE3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Rcor1Q8CFE3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Rcor1Q8CFE3 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Rcor1Q8CFE3 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Rcor1Q8CFE3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.35■■□□□ 1.33
Rcor1Q8CFE3 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Rcor1Q8CFE3 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Rcor1Q8CFE3 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC23.33■■□□□ 1.33
Rcor1Q8CFE3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rcor1Q8CFE3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rcor1Q8CFE3 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rcor1Q8CFE3 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rcor1Q8CFE3 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.3■■□□□ 1.32
Rcor1Q8CFE3 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.3■■□□□ 1.32
Rcor1Q8CFE3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rcor1Q8CFE3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rcor1Q8CFE3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rcor1Q8CFE3 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rcor1Q8CFE3 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rcor1Q8CFE3 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rcor1Q8CFE3 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rcor1Q8CFE3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rcor1Q8CFE3 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rcor1Q8CFE3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Rcor1Q8CFE3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rcor1Q8CFE3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rcor1Q8CFE3 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Rcor1Q8CFE3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rcor1Q8CFE3 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC23.24■■□□□ 1.31
Rcor1Q8CFE3 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rcor1Q8CFE3 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rcor1Q8CFE3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.23■■□□□ 1.31
Rcor1Q8CFE3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Rcor1Q8CFE3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rcor1Q8CFE3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rcor1Q8CFE3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rcor1Q8CFE3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rcor1Q8CFE3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.21■■□□□ 1.31
Rcor1Q8CFE3 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rcor1Q8CFE3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rcor1Q8CFE3 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Rcor1Q8CFE3 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rcor1Q8CFE3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Rcor1Q8CFE3 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rcor1Q8CFE3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.15■■□□□ 1.3
Rcor1Q8CFE3 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rcor1Q8CFE3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rcor1Q8CFE3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rcor1Q8CFE3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.13■■□□□ 1.29
Rcor1Q8CFE3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rcor1Q8CFE3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rcor1Q8CFE3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
Rcor1Q8CFE3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.12■■□□□ 1.29
Rcor1Q8CFE3 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rcor1Q8CFE3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rcor1Q8CFE3 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rcor1Q8CFE3 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rcor1Q8CFE3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rcor1Q8CFE3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Rcor1Q8CFE3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
Rcor1Q8CFE3 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Rcor1Q8CFE3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
Rcor1Q8CFE3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rcor1Q8CFE3 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC23.08■■□□□ 1.29
Rcor1Q8CFE3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Rcor1Q8CFE3 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Rcor1Q8CFE3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Rcor1Q8CFE3 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC23.07■■□□□ 1.28
Rcor1Q8CFE3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rcor1Q8CFE3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rcor1Q8CFE3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Rcor1Q8CFE3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Rcor1Q8CFE3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rcor1Q8CFE3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Rcor1Q8CFE3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Rcor1Q8CFE3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
Rcor1Q8CFE3 Gm43863-201ENSMUST00000203822 1192 ntBASIC23.02■■□□□ 1.28
Rcor1Q8CFE3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rcor1Q8CFE3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Rcor1Q8CFE3 Zfp131-205ENSMUST00000223812 663 ntBASIC23.01■■□□□ 1.27
Rcor1Q8CFE3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rcor1Q8CFE3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rcor1Q8CFE3 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Rcor1Q8CFE3 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC23■■□□□ 1.27
Rcor1Q8CFE3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Rcor1Q8CFE3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
Rcor1Q8CFE3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Rcor1Q8CFE3 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC22.99■■□□□ 1.27
Rcor1Q8CFE3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Rcor1Q8CFE3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms