Protein–RNA interactions for Protein: Q8C940

A730049H05Rik, RIKEN cDNA A730049H05 gene, mousemouse

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A730049H05RikQ8C940 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
A730049H05RikQ8C940 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.12
A730049H05RikQ8C940 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
A730049H05RikQ8C940 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
A730049H05RikQ8C940 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
A730049H05RikQ8C940 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
A730049H05RikQ8C940 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
A730049H05RikQ8C940 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
A730049H05RikQ8C940 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
A730049H05RikQ8C940 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
A730049H05RikQ8C940 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
A730049H05RikQ8C940 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
A730049H05RikQ8C940 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
A730049H05RikQ8C940 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
A730049H05RikQ8C940 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
A730049H05RikQ8C940 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
A730049H05RikQ8C940 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
A730049H05RikQ8C940 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
A730049H05RikQ8C940 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
A730049H05RikQ8C940 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
A730049H05RikQ8C940 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.94■■□□□ 1.1
A730049H05RikQ8C940 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
A730049H05RikQ8C940 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.93■■□□□ 1.1
A730049H05RikQ8C940 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
A730049H05RikQ8C940 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
A730049H05RikQ8C940 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.92■■□□□ 1.1
A730049H05RikQ8C940 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
A730049H05RikQ8C940 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
A730049H05RikQ8C940 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.91■■□□□ 1.1
A730049H05RikQ8C940 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
A730049H05RikQ8C940 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
A730049H05RikQ8C940 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
A730049H05RikQ8C940 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
A730049H05RikQ8C940 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
A730049H05RikQ8C940 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
A730049H05RikQ8C940 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
A730049H05RikQ8C940 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.89■■□□□ 1.09
A730049H05RikQ8C940 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
A730049H05RikQ8C940 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
A730049H05RikQ8C940 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.88■■□□□ 1.09
A730049H05RikQ8C940 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.88■■□□□ 1.09
A730049H05RikQ8C940 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
A730049H05RikQ8C940 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
A730049H05RikQ8C940 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.85■■□□□ 1.09
A730049H05RikQ8C940 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.84■■□□□ 1.09
A730049H05RikQ8C940 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
A730049H05RikQ8C940 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
A730049H05RikQ8C940 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
A730049H05RikQ8C940 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
A730049H05RikQ8C940 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
A730049H05RikQ8C940 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
A730049H05RikQ8C940 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
A730049H05RikQ8C940 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
A730049H05RikQ8C940 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
A730049H05RikQ8C940 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.79■■□□□ 1.08
A730049H05RikQ8C940 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
A730049H05RikQ8C940 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
A730049H05RikQ8C940 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
A730049H05RikQ8C940 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
A730049H05RikQ8C940 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
A730049H05RikQ8C940 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
A730049H05RikQ8C940 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
A730049H05RikQ8C940 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
A730049H05RikQ8C940 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
A730049H05RikQ8C940 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
A730049H05RikQ8C940 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
A730049H05RikQ8C940 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
A730049H05RikQ8C940 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
A730049H05RikQ8C940 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
A730049H05RikQ8C940 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
A730049H05RikQ8C940 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
A730049H05RikQ8C940 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
A730049H05RikQ8C940 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
A730049H05RikQ8C940 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
A730049H05RikQ8C940 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
A730049H05RikQ8C940 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
A730049H05RikQ8C940 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
A730049H05RikQ8C940 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
A730049H05RikQ8C940 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
A730049H05RikQ8C940 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.69■■□□□ 1.06
A730049H05RikQ8C940 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
A730049H05RikQ8C940 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
A730049H05RikQ8C940 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
A730049H05RikQ8C940 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.68■■□□□ 1.06
A730049H05RikQ8C940 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.68■■□□□ 1.06
A730049H05RikQ8C940 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
A730049H05RikQ8C940 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC21.67■■□□□ 1.06
A730049H05RikQ8C940 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
A730049H05RikQ8C940 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
A730049H05RikQ8C940 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.67■■□□□ 1.06
A730049H05RikQ8C940 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
A730049H05RikQ8C940 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.65■■□□□ 1.06
A730049H05RikQ8C940 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.65■■□□□ 1.06
A730049H05RikQ8C940 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms