Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Pabpc5Q8C7D3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Pabpc5Q8C7D3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pabpc5Q8C7D3 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC24.27■■□□□ 1.48
Pabpc5Q8C7D3 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC24.27■■□□□ 1.48
Pabpc5Q8C7D3 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pabpc5Q8C7D3 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Pabpc5Q8C7D3 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
Pabpc5Q8C7D3 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pabpc5Q8C7D3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pabpc5Q8C7D3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pabpc5Q8C7D3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Pabpc5Q8C7D3 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Pabpc5Q8C7D3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Pabpc5Q8C7D3 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Pabpc5Q8C7D3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpc5Q8C7D3 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpc5Q8C7D3 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Pabpc5Q8C7D3 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Pabpc5Q8C7D3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpc5Q8C7D3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpc5Q8C7D3 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpc5Q8C7D3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Pabpc5Q8C7D3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC24.17■■□□□ 1.46
Pabpc5Q8C7D3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Pabpc5Q8C7D3 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpc5Q8C7D3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Pabpc5Q8C7D3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Pabpc5Q8C7D3 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC24.16■■□□□ 1.46
Pabpc5Q8C7D3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC24.16■■□□□ 1.46
Pabpc5Q8C7D3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
Pabpc5Q8C7D3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpc5Q8C7D3 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpc5Q8C7D3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Pabpc5Q8C7D3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
Pabpc5Q8C7D3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpc5Q8C7D3 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpc5Q8C7D3 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC24.12■■□□□ 1.45
Pabpc5Q8C7D3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Pabpc5Q8C7D3 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpc5Q8C7D3 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Pabpc5Q8C7D3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC24.1■■□□□ 1.45
Pabpc5Q8C7D3 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC24.09■■□□□ 1.45
Pabpc5Q8C7D3 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpc5Q8C7D3 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpc5Q8C7D3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Pabpc5Q8C7D3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC24.09■■□□□ 1.45
Pabpc5Q8C7D3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpc5Q8C7D3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pabpc5Q8C7D3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpc5Q8C7D3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pabpc5Q8C7D3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pabpc5Q8C7D3 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Pabpc5Q8C7D3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC24.03■■□□□ 1.44
Pabpc5Q8C7D3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC24.02■■□□□ 1.44
Pabpc5Q8C7D3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pabpc5Q8C7D3 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC24.02■■□□□ 1.44
Pabpc5Q8C7D3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpc5Q8C7D3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpc5Q8C7D3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.01■■□□□ 1.43
Pabpc5Q8C7D3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pabpc5Q8C7D3 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Pabpc5Q8C7D3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpc5Q8C7D3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpc5Q8C7D3 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Pabpc5Q8C7D3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpc5Q8C7D3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.99■■□□□ 1.43
Pabpc5Q8C7D3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pabpc5Q8C7D3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpc5Q8C7D3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.98■■□□□ 1.43
Pabpc5Q8C7D3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpc5Q8C7D3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pabpc5Q8C7D3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpc5Q8C7D3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpc5Q8C7D3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Pabpc5Q8C7D3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pabpc5Q8C7D3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pabpc5Q8C7D3 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Pabpc5Q8C7D3 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pabpc5Q8C7D3 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.94■■□□□ 1.42
Pabpc5Q8C7D3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pabpc5Q8C7D3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pabpc5Q8C7D3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pabpc5Q8C7D3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pabpc5Q8C7D3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pabpc5Q8C7D3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pabpc5Q8C7D3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.92■■□□□ 1.42
Pabpc5Q8C7D3 Nkain2-201ENSMUST00000092602 558 ntBASIC23.92■■□□□ 1.42
Pabpc5Q8C7D3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pabpc5Q8C7D3 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.91■■□□□ 1.42
Pabpc5Q8C7D3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pabpc5Q8C7D3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Pabpc5Q8C7D3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pabpc5Q8C7D3 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms