Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Smim4Q8C1Q6 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Smim4Q8C1Q6 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Smim4Q8C1Q6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim4Q8C1Q6 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Smim4Q8C1Q6 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Smim4Q8C1Q6 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Smim4Q8C1Q6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Smim4Q8C1Q6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim4Q8C1Q6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim4Q8C1Q6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Smim4Q8C1Q6 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.19■□□□□ 0.82
Smim4Q8C1Q6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim4Q8C1Q6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Smim4Q8C1Q6 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Smim4Q8C1Q6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Smim4Q8C1Q6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim4Q8C1Q6 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Smim4Q8C1Q6 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Smim4Q8C1Q6 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
Smim4Q8C1Q6 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Smim4Q8C1Q6 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim4Q8C1Q6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim4Q8C1Q6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Smim4Q8C1Q6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Smim4Q8C1Q6 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim4Q8C1Q6 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Smim4Q8C1Q6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smim4Q8C1Q6 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smim4Q8C1Q6 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Smim4Q8C1Q6 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim4Q8C1Q6 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim4Q8C1Q6 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Smim4Q8C1Q6 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC20.12■□□□□ 0.81
Smim4Q8C1Q6 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Smim4Q8C1Q6 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.12■□□□□ 0.81
Smim4Q8C1Q6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim4Q8C1Q6 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim4Q8C1Q6 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Smim4Q8C1Q6 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Smim4Q8C1Q6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Smim4Q8C1Q6 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
Smim4Q8C1Q6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Smim4Q8C1Q6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smim4Q8C1Q6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Smim4Q8C1Q6 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Smim4Q8C1Q6 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Smim4Q8C1Q6 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC20.08■□□□□ 0.81
Smim4Q8C1Q6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Smim4Q8C1Q6 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smim4Q8C1Q6 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.07■□□□□ 0.8
Smim4Q8C1Q6 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smim4Q8C1Q6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Smim4Q8C1Q6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Smim4Q8C1Q6 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Smim4Q8C1Q6 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim4Q8C1Q6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Smim4Q8C1Q6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Smim4Q8C1Q6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Smim4Q8C1Q6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Smim4Q8C1Q6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Smim4Q8C1Q6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Smim4Q8C1Q6 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Smim4Q8C1Q6 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.01■□□□□ 0.79
Smim4Q8C1Q6 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.01■□□□□ 0.79
Smim4Q8C1Q6 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20■□□□□ 0.79
Smim4Q8C1Q6 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC20■□□□□ 0.79
Smim4Q8C1Q6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Smim4Q8C1Q6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim4Q8C1Q6 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Smim4Q8C1Q6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim4Q8C1Q6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Smim4Q8C1Q6 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Smim4Q8C1Q6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Smim4Q8C1Q6 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Smim4Q8C1Q6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Smim4Q8C1Q6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smim4Q8C1Q6 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Smim4Q8C1Q6 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim4Q8C1Q6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Smim4Q8C1Q6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC19.94■□□□□ 0.78
Smim4Q8C1Q6 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim4Q8C1Q6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Smim4Q8C1Q6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Smim4Q8C1Q6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim4Q8C1Q6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Smim4Q8C1Q6 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC19.92■□□□□ 0.78
Smim4Q8C1Q6 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Smim4Q8C1Q6 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim4Q8C1Q6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim4Q8C1Q6 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Smim4Q8C1Q6 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC19.91■□□□□ 0.78
Smim4Q8C1Q6 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Smim4Q8C1Q6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Smim4Q8C1Q6 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smim4Q8C1Q6 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Smim4Q8C1Q6 Gm43863-201ENSMUST00000203822 1192 ntBASIC19.89■□□□□ 0.77
Smim4Q8C1Q6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Smim4Q8C1Q6 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Smim4Q8C1Q6 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 110.1 ms