Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
Cps1Q8C196 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC34.36■■■■□ 3.09
Cps1Q8C196 Mir6538-201ENSMUST00000183713 110 ntBASIC34.36■■■■□ 3.09
Cps1Q8C196 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Cps1Q8C196 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Cps1Q8C196 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC34.35■■■■□ 3.09
Cps1Q8C196 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cps1Q8C196 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC34.35■■■■□ 3.09
Cps1Q8C196 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC34.35■■■■□ 3.09
Cps1Q8C196 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC34.34■■■■□ 3.09
Cps1Q8C196 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC34.34■■■■□ 3.09
Cps1Q8C196 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
Cps1Q8C196 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC34.31■■■■□ 3.08
Cps1Q8C196 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC34.3■■■■□ 3.08
Cps1Q8C196 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC34.3■■■■□ 3.08
Cps1Q8C196 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC34.3■■■■□ 3.08
Cps1Q8C196 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC34.29■■■■□ 3.08
Cps1Q8C196 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC34.26■■■■□ 3.08
Cps1Q8C196 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC34.26■■■■□ 3.08
Cps1Q8C196 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC34.25■■■■□ 3.07
Cps1Q8C196 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC34.25■■■■□ 3.07
Cps1Q8C196 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC34.24■■■■□ 3.07
Cps1Q8C196 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC34.23■■■■□ 3.07
Cps1Q8C196 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC34.21■■■■□ 3.07
Cps1Q8C196 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC34.18■■■■□ 3.06
Cps1Q8C196 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC34.18■■■■□ 3.06
Cps1Q8C196 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC34.16■■■■□ 3.06
Cps1Q8C196 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC34.16■■■■□ 3.06
Cps1Q8C196 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC34.14■■■■□ 3.06
Cps1Q8C196 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC34.13■■■■□ 3.05
Cps1Q8C196 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC34.13■■■■□ 3.05
Cps1Q8C196 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC34.12■■■■□ 3.05
Cps1Q8C196 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Cps1Q8C196 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC34.12■■■■□ 3.05
Cps1Q8C196 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC34.1■■■■□ 3.05
Cps1Q8C196 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC34.08■■■■□ 3.05
Cps1Q8C196 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC34.07■■■■□ 3.04
Cps1Q8C196 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC34.06■■■■□ 3.04
Cps1Q8C196 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC34.05■■■■□ 3.04
Cps1Q8C196 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC34.05■■■■□ 3.04
Cps1Q8C196 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC34.05■■■■□ 3.04
Cps1Q8C196 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC34.04■■■■□ 3.04
Cps1Q8C196 AC131739.1-201ENSMUST00000221692 1245 ntBASIC34.04■■■■□ 3.04
Cps1Q8C196 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC34.04■■■■□ 3.04
Cps1Q8C196 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC34.03■■■■□ 3.04
Cps1Q8C196 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Cps1Q8C196 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC34.02■■■■□ 3.04
Cps1Q8C196 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC34.02■■■■□ 3.04
Cps1Q8C196 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC34.01■■■■□ 3.04
Cps1Q8C196 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC34■■■■□ 3.03
Cps1Q8C196 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC34■■■■□ 3.03
Cps1Q8C196 Gm6345-201ENSMUST00000180378 1691 ntBASIC34■■■■□ 3.03
Cps1Q8C196 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC33.99■■■■□ 3.03
Cps1Q8C196 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.98■■■■□ 3.03
Cps1Q8C196 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC33.96■■■■□ 3.03
Cps1Q8C196 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
Cps1Q8C196 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Cps1Q8C196 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC33.94■■■■□ 3.02
Cps1Q8C196 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
Cps1Q8C196 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC33.93■■■■□ 3.02
Cps1Q8C196 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
Cps1Q8C196 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC33.92■■■■□ 3.02
Cps1Q8C196 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC33.9■■■■□ 3.02
Cps1Q8C196 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC33.89■■■■□ 3.02
Cps1Q8C196 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC33.89■■■■□ 3.02
Cps1Q8C196 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC33.89■■■■□ 3.02
Cps1Q8C196 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC33.88■■■■□ 3.01
Cps1Q8C196 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC33.88■■■■□ 3.01
Cps1Q8C196 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC33.87■■■■□ 3.01
Cps1Q8C196 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cps1Q8C196 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cps1Q8C196 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC33.85■■■■□ 3.01
Cps1Q8C196 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC33.84■■■■□ 3.01
Cps1Q8C196 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC33.84■■■■□ 3.01
Cps1Q8C196 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC33.84■■■■□ 3.01
Cps1Q8C196 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC33.83■■■■□ 3.01
Cps1Q8C196 Gm30023-201ENSMUST00000197970 889 ntBASIC33.82■■■■□ 3
Cps1Q8C196 AC167019.3-201ENSMUST00000228225 1266 ntBASIC33.82■■■■□ 3
Cps1Q8C196 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC33.81■■■■□ 3
Cps1Q8C196 Cap2-205ENSMUST00000225824 1634 ntBASIC33.8■■■■□ 3
Cps1Q8C196 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC33.8■■■■□ 3
Cps1Q8C196 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Cps1Q8C196 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC33.8■■■■□ 3
Cps1Q8C196 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC33.8■■■■□ 3
Cps1Q8C196 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC33.78■■■■□ 3
Cps1Q8C196 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC33.78■■■■□ 3
Cps1Q8C196 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC33.78■■■■□ 3
Cps1Q8C196 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC33.77■■■■□ 3
Cps1Q8C196 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC33.77■■■■□ 3
Cps1Q8C196 Particl-201ENSMUST00000205370 1560 ntBASIC33.77■■■■□ 3
Cps1Q8C196 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC33.77■■■■□ 3
Cps1Q8C196 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■■□ 3
Cps1Q8C196 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
Cps1Q8C196 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC33.74■■■□□ 2.99
Cps1Q8C196 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC33.74■■■□□ 2.99
Cps1Q8C196 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC33.74■■■□□ 2.99
Cps1Q8C196 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC33.73■■■□□ 2.99
Cps1Q8C196 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC33.73■■■□□ 2.99
Cps1Q8C196 Gm6311-201ENSMUST00000073790 878 ntBASIC33.73■■■□□ 2.99
Cps1Q8C196 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC33.72■■■□□ 2.99
Retrieved 100 of 76,532 protein–RNA pairs in 75.7 ms