Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.29■■□□□ 1
Smg1Q8BKX6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Smg1Q8BKX6 Gm30346-201ENSMUST00000218641 1699 ntBASIC21.28■■□□□ 1
Smg1Q8BKX6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC21.28■■□□□ 1
Smg1Q8BKX6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.27■■□□□ 1
Smg1Q8BKX6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
Smg1Q8BKX6 Gm6311-201ENSMUST00000073790 878 ntBASIC21.26■□□□□ 0.99
Smg1Q8BKX6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Smg1Q8BKX6 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Smg1Q8BKX6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Smg1Q8BKX6 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smg1Q8BKX6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Smg1Q8BKX6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Smg1Q8BKX6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.23■□□□□ 0.99
Smg1Q8BKX6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Smg1Q8BKX6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Smg1Q8BKX6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Smg1Q8BKX6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Smg1Q8BKX6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Smg1Q8BKX6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Smg1Q8BKX6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Smg1Q8BKX6 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Smg1Q8BKX6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.19■□□□□ 0.98
Smg1Q8BKX6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Smg1Q8BKX6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smg1Q8BKX6 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smg1Q8BKX6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Smg1Q8BKX6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Smg1Q8BKX6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Smg1Q8BKX6 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smg1Q8BKX6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.18■□□□□ 0.98
Smg1Q8BKX6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Smg1Q8BKX6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.17■□□□□ 0.98
Smg1Q8BKX6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smg1Q8BKX6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.17■□□□□ 0.98
Smg1Q8BKX6 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smg1Q8BKX6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smg1Q8BKX6 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.16■□□□□ 0.98
Smg1Q8BKX6 Suds3-202ENSMUST00000166397 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Gm12366-201ENSMUST00000121722 873 ntBASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Gm5786-201ENSMUST00000085368 882 ntBASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smg1Q8BKX6 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Smg1Q8BKX6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smg1Q8BKX6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smg1Q8BKX6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smg1Q8BKX6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.12■□□□□ 0.97
Smg1Q8BKX6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smg1Q8BKX6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.11■□□□□ 0.97
Smg1Q8BKX6 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.11■□□□□ 0.97
Smg1Q8BKX6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.11■□□□□ 0.97
Smg1Q8BKX6 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Smg1Q8BKX6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smg1Q8BKX6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smg1Q8BKX6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smg1Q8BKX6 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC21.1■□□□□ 0.97
Smg1Q8BKX6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smg1Q8BKX6 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.09■□□□□ 0.97
Smg1Q8BKX6 Gm4799-201ENSMUST00000095396 657 ntBASIC21.09■□□□□ 0.97
Smg1Q8BKX6 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Smg1Q8BKX6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Smg1Q8BKX6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smg1Q8BKX6 Gm5812-201ENSMUST00000061073 957 ntBASIC21.07■□□□□ 0.96
Smg1Q8BKX6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
Smg1Q8BKX6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Smg1Q8BKX6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Smg1Q8BKX6 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Smg1Q8BKX6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Smg1Q8BKX6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.05■□□□□ 0.96
Smg1Q8BKX6 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC21.04■□□□□ 0.96
Smg1Q8BKX6 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Smg1Q8BKX6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Smg1Q8BKX6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smg1Q8BKX6 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Smg1Q8BKX6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.01■□□□□ 0.95
Smg1Q8BKX6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Smg1Q8BKX6 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21■□□□□ 0.95
Smg1Q8BKX6 AC131739.1-201ENSMUST00000221692 1245 ntBASIC20.99■□□□□ 0.95
Smg1Q8BKX6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Smg1Q8BKX6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Smg1Q8BKX6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smg1Q8BKX6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.97■□□□□ 0.95
Smg1Q8BKX6 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Smg1Q8BKX6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Smg1Q8BKX6 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg1Q8BKX6 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Smg1Q8BKX6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smg1Q8BKX6 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Smg1Q8BKX6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Smg1Q8BKX6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms