Protein–RNA interactions for Protein: Q8BGI7

Lrrc39, Leucine-rich repeat-containing protein 39, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc39Q8BGI7 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Lrrc39Q8BGI7 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.17■■□□□ 1.14
Lrrc39Q8BGI7 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc39Q8BGI7 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Lrrc39Q8BGI7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.16■■□□□ 1.14
Lrrc39Q8BGI7 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC22.15■■□□□ 1.14
Lrrc39Q8BGI7 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc39Q8BGI7 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Lrrc39Q8BGI7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Lrrc39Q8BGI7 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Lrrc39Q8BGI7 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrc39Q8BGI7 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrc39Q8BGI7 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Lrrc39Q8BGI7 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Lrrc39Q8BGI7 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Lrrc39Q8BGI7 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Lrrc39Q8BGI7 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
Lrrc39Q8BGI7 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.1■■□□□ 1.13
Lrrc39Q8BGI7 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc39Q8BGI7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc39Q8BGI7 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Lrrc39Q8BGI7 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC22.09■■□□□ 1.13
Lrrc39Q8BGI7 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Lrrc39Q8BGI7 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Lrrc39Q8BGI7 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.08■■□□□ 1.12
Lrrc39Q8BGI7 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lrrc39Q8BGI7 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Lrrc39Q8BGI7 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrc39Q8BGI7 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrc39Q8BGI7 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Lrrc39Q8BGI7 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Lrrc39Q8BGI7 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.06■■□□□ 1.12
Lrrc39Q8BGI7 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Lrrc39Q8BGI7 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.05■■□□□ 1.12
Lrrc39Q8BGI7 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
Lrrc39Q8BGI7 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrc39Q8BGI7 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Lrrc39Q8BGI7 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Lrrc39Q8BGI7 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Lrrc39Q8BGI7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrc39Q8BGI7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
Lrrc39Q8BGI7 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC22.01■■□□□ 1.11
Lrrc39Q8BGI7 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Lrrc39Q8BGI7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
Lrrc39Q8BGI7 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Lrrc39Q8BGI7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.99■■□□□ 1.11
Lrrc39Q8BGI7 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc39Q8BGI7 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Lrrc39Q8BGI7 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc39Q8BGI7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Lrrc39Q8BGI7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Lrrc39Q8BGI7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc39Q8BGI7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc39Q8BGI7 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc39Q8BGI7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Lrrc39Q8BGI7 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc39Q8BGI7 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc39Q8BGI7 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Lrrc39Q8BGI7 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrc39Q8BGI7 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrc39Q8BGI7 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrc39Q8BGI7 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Lrrc39Q8BGI7 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc39Q8BGI7 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc39Q8BGI7 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Lrrc39Q8BGI7 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
Lrrc39Q8BGI7 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Lrrc39Q8BGI7 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.92■■□□□ 1.1
Lrrc39Q8BGI7 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc39Q8BGI7 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Lrrc39Q8BGI7 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
Lrrc39Q8BGI7 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrc39Q8BGI7 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrc39Q8BGI7 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Lrrc39Q8BGI7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Lrrc39Q8BGI7 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrc39Q8BGI7 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Lrrc39Q8BGI7 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrc39Q8BGI7 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Lrrc39Q8BGI7 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
Lrrc39Q8BGI7 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Lrrc39Q8BGI7 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.85■■□□□ 1.09
Lrrc39Q8BGI7 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Lrrc39Q8BGI7 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc39Q8BGI7 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc39Q8BGI7 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Lrrc39Q8BGI7 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Lrrc39Q8BGI7 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Lrrc39Q8BGI7 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Lrrc39Q8BGI7 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc39Q8BGI7 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc39Q8BGI7 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Lrrc39Q8BGI7 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Lrrc39Q8BGI7 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms