Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh19Q80TF3 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh19Q80TF3 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.01■■□□□ 1.43
Pcdh19Q80TF3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdh19Q80TF3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdh19Q80TF3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdh19Q80TF3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
Pcdh19Q80TF3 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdh19Q80TF3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdh19Q80TF3 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
Pcdh19Q80TF3 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Pcdh19Q80TF3 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.97■■□□□ 1.43
Pcdh19Q80TF3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh19Q80TF3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh19Q80TF3 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Pcdh19Q80TF3 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdh19Q80TF3 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdh19Q80TF3 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC23.94■■□□□ 1.42
Pcdh19Q80TF3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdh19Q80TF3 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdh19Q80TF3 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh19Q80TF3 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh19Q80TF3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC23.93■■□□□ 1.42
Pcdh19Q80TF3 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdh19Q80TF3 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.92■■□□□ 1.42
Pcdh19Q80TF3 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdh19Q80TF3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdh19Q80TF3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.91■■□□□ 1.42
Pcdh19Q80TF3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh19Q80TF3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh19Q80TF3 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh19Q80TF3 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdh19Q80TF3 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdh19Q80TF3 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC23.89■■□□□ 1.41
Pcdh19Q80TF3 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC23.89■■□□□ 1.41
Pcdh19Q80TF3 Gm5987-201ENSMUST00000196433 1151 ntBASIC23.85■■□□□ 1.41
Pcdh19Q80TF3 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh19Q80TF3 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
Pcdh19Q80TF3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdh19Q80TF3 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Pcdh19Q80TF3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.83■■□□□ 1.41
Pcdh19Q80TF3 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.82■■□□□ 1.4
Pcdh19Q80TF3 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.82■■□□□ 1.4
Pcdh19Q80TF3 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdh19Q80TF3 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.8■■□□□ 1.4
Pcdh19Q80TF3 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh19Q80TF3 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdh19Q80TF3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
Pcdh19Q80TF3 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdh19Q80TF3 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.79■■□□□ 1.4
Pcdh19Q80TF3 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC23.78■■□□□ 1.4
Pcdh19Q80TF3 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh19Q80TF3 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdh19Q80TF3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
Pcdh19Q80TF3 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdh19Q80TF3 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC23.77■■□□□ 1.4
Pcdh19Q80TF3 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdh19Q80TF3 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh19Q80TF3 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh19Q80TF3 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdh19Q80TF3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Pcdh19Q80TF3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
Pcdh19Q80TF3 Gm7432-201ENSMUST00000210343 879 ntBASIC23.74■■□□□ 1.39
Pcdh19Q80TF3 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh19Q80TF3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh19Q80TF3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdh19Q80TF3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdh19Q80TF3 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.73■■□□□ 1.39
Pcdh19Q80TF3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.73■■□□□ 1.39
Pcdh19Q80TF3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
Pcdh19Q80TF3 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh19Q80TF3 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh19Q80TF3 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdh19Q80TF3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdh19Q80TF3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.7■■□□□ 1.39
Pcdh19Q80TF3 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Pcdh19Q80TF3 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.69■■□□□ 1.38
Pcdh19Q80TF3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdh19Q80TF3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh19Q80TF3 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh19Q80TF3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdh19Q80TF3 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdh19Q80TF3 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdh19Q80TF3 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdh19Q80TF3 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh19Q80TF3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.66■■□□□ 1.38
Pcdh19Q80TF3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdh19Q80TF3 Zxda-201ENSMUST00000117281 2621 ntBASIC23.66■■□□□ 1.38
Pcdh19Q80TF3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Pcdh19Q80TF3 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh19Q80TF3 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.65■■□□□ 1.38
Pcdh19Q80TF3 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh19Q80TF3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.65■■□□□ 1.38
Pcdh19Q80TF3 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh19Q80TF3 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
Pcdh19Q80TF3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdh19Q80TF3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdh19Q80TF3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdh19Q80TF3 Pcf11-205ENSMUST00000208255 1720 ntBASIC23.63■■□□□ 1.37
Pcdh19Q80TF3 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms