Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.99■■■□□ 2.23
Scn10aQ6QIY3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.97■■■□□ 2.23
Scn10aQ6QIY3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
Scn10aQ6QIY3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC28.96■■■□□ 2.23
Scn10aQ6QIY3 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.23
Scn10aQ6QIY3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
Scn10aQ6QIY3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC28.93■■■□□ 2.22
Scn10aQ6QIY3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC28.93■■■□□ 2.22
Scn10aQ6QIY3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
Scn10aQ6QIY3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Scn10aQ6QIY3 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC28.92■■■□□ 2.22
Scn10aQ6QIY3 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC28.9■■■□□ 2.22
Scn10aQ6QIY3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Scn10aQ6QIY3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC28.9■■■□□ 2.22
Scn10aQ6QIY3 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Scn10aQ6QIY3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC28.89■■■□□ 2.22
Scn10aQ6QIY3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.89■■■□□ 2.22
Scn10aQ6QIY3 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC28.88■■■□□ 2.21
Scn10aQ6QIY3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
Scn10aQ6QIY3 Gm6658-202ENSMUST00000209493 1885 ntBASIC28.86■■■□□ 2.21
Scn10aQ6QIY3 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
Scn10aQ6QIY3 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Scn10aQ6QIY3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
Scn10aQ6QIY3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
Scn10aQ6QIY3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.2
Scn10aQ6QIY3 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Scn10aQ6QIY3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
Scn10aQ6QIY3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Scn10aQ6QIY3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
Scn10aQ6QIY3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.79■■■□□ 2.2
Scn10aQ6QIY3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Scn10aQ6QIY3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC28.78■■■□□ 2.2
Scn10aQ6QIY3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC28.78■■■□□ 2.2
Scn10aQ6QIY3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Scn10aQ6QIY3 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Scn10aQ6QIY3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC28.74■■■□□ 2.19
Scn10aQ6QIY3 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
Scn10aQ6QIY3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC28.72■■■□□ 2.19
Scn10aQ6QIY3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
Scn10aQ6QIY3 Cap2-205ENSMUST00000225824 1634 ntBASIC28.71■■■□□ 2.19
Scn10aQ6QIY3 Gm6345-201ENSMUST00000180378 1691 ntBASIC28.71■■■□□ 2.19
Scn10aQ6QIY3 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
Scn10aQ6QIY3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Scn10aQ6QIY3 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Scn10aQ6QIY3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Scn10aQ6QIY3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Scn10aQ6QIY3 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.68■■■□□ 2.18
Scn10aQ6QIY3 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Scn10aQ6QIY3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Scn10aQ6QIY3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Scn10aQ6QIY3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Scn10aQ6QIY3 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.64■■■□□ 2.18
Scn10aQ6QIY3 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC28.62■■■□□ 2.17
Scn10aQ6QIY3 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
Scn10aQ6QIY3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC28.61■■■□□ 2.17
Scn10aQ6QIY3 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.61■■■□□ 2.17
Scn10aQ6QIY3 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Scn10aQ6QIY3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC28.6■■■□□ 2.17
Scn10aQ6QIY3 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Scn10aQ6QIY3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
Scn10aQ6QIY3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.59■■■□□ 2.17
Scn10aQ6QIY3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.59■■■□□ 2.17
Scn10aQ6QIY3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Scn10aQ6QIY3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
Scn10aQ6QIY3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Scn10aQ6QIY3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Scn10aQ6QIY3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC28.57■■■□□ 2.16
Scn10aQ6QIY3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC28.57■■■□□ 2.16
Scn10aQ6QIY3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.57■■■□□ 2.16
Scn10aQ6QIY3 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28.55■■■□□ 2.16
Scn10aQ6QIY3 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Scn10aQ6QIY3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Scn10aQ6QIY3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC28.54■■■□□ 2.16
Scn10aQ6QIY3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
Scn10aQ6QIY3 Gm6311-201ENSMUST00000073790 878 ntBASIC28.53■■■□□ 2.16
Scn10aQ6QIY3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Scn10aQ6QIY3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
Scn10aQ6QIY3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Scn10aQ6QIY3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC28.52■■■□□ 2.16
Scn10aQ6QIY3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Scn10aQ6QIY3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scn10aQ6QIY3 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Scn10aQ6QIY3 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.49■■■□□ 2.15
Scn10aQ6QIY3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Scn10aQ6QIY3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Scn10aQ6QIY3 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Scn10aQ6QIY3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC28.47■■■□□ 2.15
Scn10aQ6QIY3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC28.46■■■□□ 2.15
Scn10aQ6QIY3 Particl-201ENSMUST00000205370 1560 ntBASIC28.46■■■□□ 2.15
Scn10aQ6QIY3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Scn10aQ6QIY3 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Scn10aQ6QIY3 Gm30023-201ENSMUST00000197970 889 ntBASIC28.45■■■□□ 2.14
Scn10aQ6QIY3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
Scn10aQ6QIY3 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.45■■■□□ 2.14
Scn10aQ6QIY3 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC28.45■■■□□ 2.14
Scn10aQ6QIY3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scn10aQ6QIY3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scn10aQ6QIY3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Scn10aQ6QIY3 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC28.43■■■□□ 2.14
Scn10aQ6QIY3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Retrieved 100 of 76,532 protein–RNA pairs in 652.3 ms