Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC33.06■■■□□ 2.88
Chd4Q6PDQ2 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
Chd4Q6PDQ2 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Chd4Q6PDQ2 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Chd4Q6PDQ2 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC33.05■■■□□ 2.88
Chd4Q6PDQ2 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC33.05■■■□□ 2.88
Chd4Q6PDQ2 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC33.04■■■□□ 2.88
Chd4Q6PDQ2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC33.04■■■□□ 2.88
Chd4Q6PDQ2 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC33.04■■■□□ 2.88
Chd4Q6PDQ2 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Chd4Q6PDQ2 Gm6345-201ENSMUST00000180378 1691 ntBASIC33.01■■■□□ 2.88
Chd4Q6PDQ2 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC33.01■■■□□ 2.88
Chd4Q6PDQ2 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC33.01■■■□□ 2.87
Chd4Q6PDQ2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC33■■■□□ 2.87
Chd4Q6PDQ2 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC33■■■□□ 2.87
Chd4Q6PDQ2 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Chd4Q6PDQ2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.99■■■□□ 2.87
Chd4Q6PDQ2 Gm7432-201ENSMUST00000210343 879 ntBASIC32.98■■■□□ 2.87
Chd4Q6PDQ2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC32.98■■■□□ 2.87
Chd4Q6PDQ2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC32.98■■■□□ 2.87
Chd4Q6PDQ2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC32.97■■■□□ 2.87
Chd4Q6PDQ2 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC32.96■■■□□ 2.87
Chd4Q6PDQ2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC32.96■■■□□ 2.87
Chd4Q6PDQ2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC32.96■■■□□ 2.87
Chd4Q6PDQ2 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
Chd4Q6PDQ2 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC32.94■■■□□ 2.86
Chd4Q6PDQ2 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC32.93■■■□□ 2.86
Chd4Q6PDQ2 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC32.93■■■□□ 2.86
Chd4Q6PDQ2 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC32.92■■■□□ 2.86
Chd4Q6PDQ2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC32.92■■■□□ 2.86
Chd4Q6PDQ2 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC32.92■■■□□ 2.86
Chd4Q6PDQ2 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.92■■■□□ 2.86
Chd4Q6PDQ2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC32.91■■■□□ 2.86
Chd4Q6PDQ2 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC32.9■■■□□ 2.86
Chd4Q6PDQ2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
Chd4Q6PDQ2 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC32.87■■■□□ 2.85
Chd4Q6PDQ2 Gm11599-201ENSMUST00000118720 878 ntBASIC32.87■■■□□ 2.85
Chd4Q6PDQ2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
Chd4Q6PDQ2 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
Chd4Q6PDQ2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC32.82■■■□□ 2.84
Chd4Q6PDQ2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Chd4Q6PDQ2 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC32.81■■■□□ 2.84
Chd4Q6PDQ2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC32.8■■■□□ 2.84
Chd4Q6PDQ2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC32.8■■■□□ 2.84
Chd4Q6PDQ2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
Chd4Q6PDQ2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC32.79■■■□□ 2.84
Chd4Q6PDQ2 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC32.77■■■□□ 2.84
Chd4Q6PDQ2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC32.77■■■□□ 2.84
Chd4Q6PDQ2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
Chd4Q6PDQ2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC32.76■■■□□ 2.83
Chd4Q6PDQ2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC32.75■■■□□ 2.83
Chd4Q6PDQ2 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Chd4Q6PDQ2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Chd4Q6PDQ2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC32.73■■■□□ 2.83
Chd4Q6PDQ2 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Chd4Q6PDQ2 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
Chd4Q6PDQ2 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Chd4Q6PDQ2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Chd4Q6PDQ2 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC32.68■■■□□ 2.82
Chd4Q6PDQ2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Chd4Q6PDQ2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC32.67■■■□□ 2.82
Chd4Q6PDQ2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC32.67■■■□□ 2.82
Chd4Q6PDQ2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC32.67■■■□□ 2.82
Chd4Q6PDQ2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Chd4Q6PDQ2 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC32.64■■■□□ 2.82
Chd4Q6PDQ2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC32.63■■■□□ 2.81
Chd4Q6PDQ2 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Chd4Q6PDQ2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Chd4Q6PDQ2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
Chd4Q6PDQ2 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC32.59■■■□□ 2.81
Chd4Q6PDQ2 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Chd4Q6PDQ2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC32.59■■■□□ 2.81
Chd4Q6PDQ2 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Chd4Q6PDQ2 Gm30023-201ENSMUST00000197970 889 ntBASIC32.58■■■□□ 2.81
Chd4Q6PDQ2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Chd4Q6PDQ2 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC32.58■■■□□ 2.81
Chd4Q6PDQ2 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Chd4Q6PDQ2 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
Chd4Q6PDQ2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC32.57■■■□□ 2.8
Chd4Q6PDQ2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC32.55■■■□□ 2.8
Chd4Q6PDQ2 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC32.55■■■□□ 2.8
Chd4Q6PDQ2 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC32.55■■■□□ 2.8
Chd4Q6PDQ2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Chd4Q6PDQ2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
Chd4Q6PDQ2 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
Chd4Q6PDQ2 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC32.53■■■□□ 2.8
Chd4Q6PDQ2 Gm11175-201ENSMUST00000116172 543 ntBASIC32.52■■■□□ 2.8
Chd4Q6PDQ2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Chd4Q6PDQ2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Chd4Q6PDQ2 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC32.51■■■□□ 2.79
Chd4Q6PDQ2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Chd4Q6PDQ2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC32.5■■■□□ 2.79
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms