Protein–RNA interactions for Protein: Q6PCM1

Kdm3a, Lysine-specific demethylase 3A, mousemouse

Predictions only

Length 1,323 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm3aQ6PCM1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
Kdm3aQ6PCM1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Kdm3aQ6PCM1 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Kdm3aQ6PCM1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC29.89■■■□□ 2.38
Kdm3aQ6PCM1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
Kdm3aQ6PCM1 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.37
Kdm3aQ6PCM1 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC29.88■■■□□ 2.37
Kdm3aQ6PCM1 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
Kdm3aQ6PCM1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Kdm3aQ6PCM1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC29.87■■■□□ 2.37
Kdm3aQ6PCM1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC29.86■■■□□ 2.37
Kdm3aQ6PCM1 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC29.86■■■□□ 2.37
Kdm3aQ6PCM1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Kdm3aQ6PCM1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC29.85■■■□□ 2.37
Kdm3aQ6PCM1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
Kdm3aQ6PCM1 Nkain2-201ENSMUST00000092602 558 ntBASIC29.85■■■□□ 2.37
Kdm3aQ6PCM1 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC29.85■■■□□ 2.37
Kdm3aQ6PCM1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC29.84■■■□□ 2.37
Kdm3aQ6PCM1 Zxda-201ENSMUST00000117281 2621 ntBASIC29.83■■■□□ 2.37
Kdm3aQ6PCM1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
Kdm3aQ6PCM1 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC29.83■■■□□ 2.37
Kdm3aQ6PCM1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
Kdm3aQ6PCM1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC29.82■■■□□ 2.36
Kdm3aQ6PCM1 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Kdm3aQ6PCM1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Kdm3aQ6PCM1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
Kdm3aQ6PCM1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
Kdm3aQ6PCM1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
Kdm3aQ6PCM1 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm3aQ6PCM1 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC29.75■■■□□ 2.35
Kdm3aQ6PCM1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC29.75■■■□□ 2.35
Kdm3aQ6PCM1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
Kdm3aQ6PCM1 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm3aQ6PCM1 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Kdm3aQ6PCM1 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
Kdm3aQ6PCM1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
Kdm3aQ6PCM1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC29.72■■■□□ 2.35
Kdm3aQ6PCM1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC29.71■■■□□ 2.35
Kdm3aQ6PCM1 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC29.7■■■□□ 2.34
Kdm3aQ6PCM1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Kdm3aQ6PCM1 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC29.68■■■□□ 2.34
Kdm3aQ6PCM1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Kdm3aQ6PCM1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Kdm3aQ6PCM1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
Kdm3aQ6PCM1 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC29.67■■■□□ 2.34
Kdm3aQ6PCM1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC29.67■■■□□ 2.34
Kdm3aQ6PCM1 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
Kdm3aQ6PCM1 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
Kdm3aQ6PCM1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
Kdm3aQ6PCM1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
Kdm3aQ6PCM1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.34
Kdm3aQ6PCM1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC29.64■■■□□ 2.34
Kdm3aQ6PCM1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Kdm3aQ6PCM1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Kdm3aQ6PCM1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC29.63■■■□□ 2.33
Kdm3aQ6PCM1 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Kdm3aQ6PCM1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Kdm3aQ6PCM1 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC29.62■■■□□ 2.33
Kdm3aQ6PCM1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
Kdm3aQ6PCM1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Kdm3aQ6PCM1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC29.61■■■□□ 2.33
Kdm3aQ6PCM1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Kdm3aQ6PCM1 Gm43445-201ENSMUST00000198564 2091 ntBASIC29.6■■■□□ 2.33
Kdm3aQ6PCM1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC29.6■■■□□ 2.33
Kdm3aQ6PCM1 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Kdm3aQ6PCM1 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
Kdm3aQ6PCM1 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Kdm3aQ6PCM1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Kdm3aQ6PCM1 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Kdm3aQ6PCM1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Kdm3aQ6PCM1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC29.55■■■□□ 2.32
Kdm3aQ6PCM1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC29.55■■■□□ 2.32
Kdm3aQ6PCM1 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Kdm3aQ6PCM1 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
Kdm3aQ6PCM1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC29.53■■■□□ 2.32
Kdm3aQ6PCM1 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Kdm3aQ6PCM1 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Kdm3aQ6PCM1 Pcf11-205ENSMUST00000208255 1720 ntBASIC29.52■■■□□ 2.32
Kdm3aQ6PCM1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Kdm3aQ6PCM1 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC29.49■■■□□ 2.31
Kdm3aQ6PCM1 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC29.48■■■□□ 2.31
Kdm3aQ6PCM1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC29.47■■■□□ 2.31
Kdm3aQ6PCM1 Gm9905-201ENSMUST00000065740 1845 ntBASIC29.47■■■□□ 2.31
Kdm3aQ6PCM1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC29.46■■■□□ 2.31
Kdm3aQ6PCM1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
Kdm3aQ6PCM1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
Kdm3aQ6PCM1 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Kdm3aQ6PCM1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Kdm3aQ6PCM1 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC29.45■■■□□ 2.31
Kdm3aQ6PCM1 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
Kdm3aQ6PCM1 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC29.45■■■□□ 2.3
Kdm3aQ6PCM1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Kdm3aQ6PCM1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC29.45■■■□□ 2.3
Kdm3aQ6PCM1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Kdm3aQ6PCM1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Kdm3aQ6PCM1 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC29.43■■■□□ 2.3
Kdm3aQ6PCM1 Gm30023-201ENSMUST00000197970 889 ntBASIC29.43■■■□□ 2.3
Kdm3aQ6PCM1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Kdm3aQ6PCM1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
Kdm3aQ6PCM1 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC29.41■■■□□ 2.3
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms