Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Scube3Q66PY1 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Scube3Q66PY1 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Scube3Q66PY1 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scube3Q66PY1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scube3Q66PY1 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Scube3Q66PY1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Scube3Q66PY1 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Scube3Q66PY1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
Scube3Q66PY1 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scube3Q66PY1 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scube3Q66PY1 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
Scube3Q66PY1 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC25.72■■□□□ 1.71
Scube3Q66PY1 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
Scube3Q66PY1 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
Scube3Q66PY1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
Scube3Q66PY1 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC25.7■■□□□ 1.71
Scube3Q66PY1 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scube3Q66PY1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Scube3Q66PY1 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
Scube3Q66PY1 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC25.69■■□□□ 1.7
Scube3Q66PY1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC25.69■■□□□ 1.7
Scube3Q66PY1 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC25.69■■□□□ 1.7
Scube3Q66PY1 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
Scube3Q66PY1 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
Scube3Q66PY1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Scube3Q66PY1 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scube3Q66PY1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
Scube3Q66PY1 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scube3Q66PY1 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scube3Q66PY1 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Scube3Q66PY1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC25.64■■□□□ 1.7
Scube3Q66PY1 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Scube3Q66PY1 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
Scube3Q66PY1 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC25.59■■□□□ 1.69
Scube3Q66PY1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scube3Q66PY1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
Scube3Q66PY1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scube3Q66PY1 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scube3Q66PY1 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
Scube3Q66PY1 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
Scube3Q66PY1 Gm9939-201ENSMUST00000067161 1154 ntBASIC25.57■■□□□ 1.68
Scube3Q66PY1 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
Scube3Q66PY1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scube3Q66PY1 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC25.56■■□□□ 1.68
Scube3Q66PY1 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
Scube3Q66PY1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC25.55■■□□□ 1.68
Scube3Q66PY1 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scube3Q66PY1 Amer2-203ENSMUST00000225247 2662 ntBASIC25.55■■□□□ 1.68
Scube3Q66PY1 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Scube3Q66PY1 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
Scube3Q66PY1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
Scube3Q66PY1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
Scube3Q66PY1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC25.51■■□□□ 1.68
Scube3Q66PY1 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
Scube3Q66PY1 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Scube3Q66PY1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
Scube3Q66PY1 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Scube3Q66PY1 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC25.49■■□□□ 1.67
Scube3Q66PY1 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Scube3Q66PY1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Scube3Q66PY1 Gm42809-201ENSMUST00000198429 1138 ntBASIC25.48■■□□□ 1.67
Scube3Q66PY1 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
Scube3Q66PY1 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
Scube3Q66PY1 Pcf11-205ENSMUST00000208255 1720 ntBASIC25.47■■□□□ 1.67
Scube3Q66PY1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Scube3Q66PY1 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Scube3Q66PY1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC25.46■■□□□ 1.67
Scube3Q66PY1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC25.46■■□□□ 1.67
Scube3Q66PY1 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Scube3Q66PY1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Scube3Q66PY1 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC25.44■■□□□ 1.66
Scube3Q66PY1 Nkain2-201ENSMUST00000092602 558 ntBASIC25.44■■□□□ 1.66
Scube3Q66PY1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
Scube3Q66PY1 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
Scube3Q66PY1 Gm6821-201ENSMUST00000107540 542 ntBASIC25.41■■□□□ 1.66
Scube3Q66PY1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC25.41■■□□□ 1.66
Scube3Q66PY1 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC25.41■■□□□ 1.66
Scube3Q66PY1 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Scube3Q66PY1 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.4■■□□□ 1.66
Scube3Q66PY1 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
Scube3Q66PY1 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.4■■□□□ 1.66
Scube3Q66PY1 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
Scube3Q66PY1 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Scube3Q66PY1 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Scube3Q66PY1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC25.38■■□□□ 1.65
Scube3Q66PY1 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
Scube3Q66PY1 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.37■■□□□ 1.65
Scube3Q66PY1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC25.36■■□□□ 1.65
Scube3Q66PY1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC25.35■■□□□ 1.65
Scube3Q66PY1 Gm8503-201ENSMUST00000118131 455 ntBASIC25.34■■□□□ 1.65
Scube3Q66PY1 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC25.34■■□□□ 1.65
Scube3Q66PY1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms