Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC21.27■■□□□ 1
Tff3Q62395 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Tff3Q62395 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Tff3Q62395 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC21.26■□□□□ 0.99
Tff3Q62395 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Tff3Q62395 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Tff3Q62395 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Tff3Q62395 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Tff3Q62395 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tff3Q62395 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.22■□□□□ 0.99
Tff3Q62395 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
Tff3Q62395 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Tff3Q62395 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tff3Q62395 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tff3Q62395 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Tff3Q62395 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Tff3Q62395 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.2■□□□□ 0.98
Tff3Q62395 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tff3Q62395 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Tff3Q62395 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Tff3Q62395 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Tff3Q62395 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Tff3Q62395 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tff3Q62395 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC21.17■□□□□ 0.98
Tff3Q62395 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Tff3Q62395 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.16■□□□□ 0.98
Tff3Q62395 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Tff3Q62395 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tff3Q62395 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Tff3Q62395 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC21.15■□□□□ 0.98
Tff3Q62395 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Tff3Q62395 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Tff3Q62395 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.13■□□□□ 0.97
Tff3Q62395 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Tff3Q62395 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC21.12■□□□□ 0.97
Tff3Q62395 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Tff3Q62395 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC21.11■□□□□ 0.97
Tff3Q62395 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.1■□□□□ 0.97
Tff3Q62395 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC21.09■□□□□ 0.97
Tff3Q62395 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Tff3Q62395 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.09■□□□□ 0.97
Tff3Q62395 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
Tff3Q62395 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tff3Q62395 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Tff3Q62395 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Tff3Q62395 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tff3Q62395 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tff3Q62395 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tff3Q62395 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tff3Q62395 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC21.06■□□□□ 0.96
Tff3Q62395 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.06■□□□□ 0.96
Tff3Q62395 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tff3Q62395 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tff3Q62395 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tff3Q62395 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Tff3Q62395 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tff3Q62395 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Tff3Q62395 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tff3Q62395 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Tff3Q62395 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tff3Q62395 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tff3Q62395 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tff3Q62395 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tff3Q62395 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tff3Q62395 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Tff3Q62395 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tff3Q62395 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tff3Q62395 Gm7432-201ENSMUST00000210343 879 ntBASIC21.01■□□□□ 0.95
Tff3Q62395 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tff3Q62395 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tff3Q62395 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tff3Q62395 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Tff3Q62395 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tff3Q62395 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.99■□□□□ 0.95
Tff3Q62395 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tff3Q62395 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC20.98■□□□□ 0.95
Tff3Q62395 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tff3Q62395 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC20.98■□□□□ 0.95
Tff3Q62395 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Tff3Q62395 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tff3Q62395 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tff3Q62395 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tff3Q62395 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tff3Q62395 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tff3Q62395 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tff3Q62395 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tff3Q62395 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tff3Q62395 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC20.96■□□□□ 0.95
Tff3Q62395 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tff3Q62395 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tff3Q62395 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Tff3Q62395 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Tff3Q62395 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.95■□□□□ 0.94
Tff3Q62395 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC20.94■□□□□ 0.94
Tff3Q62395 Zxda-201ENSMUST00000117281 2621 ntBASIC20.93■□□□□ 0.94
Tff3Q62395 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tff3Q62395 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.93■□□□□ 0.94
Tff3Q62395 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC20.92■□□□□ 0.94
Tff3Q62395 Gm30023-201ENSMUST00000197970 889 ntBASIC20.92■□□□□ 0.94
Tff3Q62395 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 8.8 ms