Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.91■■□□□ 1.42
AtmQ62388 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.9■■□□□ 1.42
AtmQ62388 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
AtmQ62388 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC23.9■■□□□ 1.42
AtmQ62388 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
AtmQ62388 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
AtmQ62388 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
AtmQ62388 Gm6311-201ENSMUST00000073790 878 ntBASIC23.89■■□□□ 1.42
AtmQ62388 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
AtmQ62388 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.88■■□□□ 1.41
AtmQ62388 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.88■■□□□ 1.41
AtmQ62388 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.88■■□□□ 1.41
AtmQ62388 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
AtmQ62388 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
AtmQ62388 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
AtmQ62388 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
AtmQ62388 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
AtmQ62388 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.85■■□□□ 1.41
AtmQ62388 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
AtmQ62388 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
AtmQ62388 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
AtmQ62388 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
AtmQ62388 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
AtmQ62388 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.81■■□□□ 1.4
AtmQ62388 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
AtmQ62388 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
AtmQ62388 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
AtmQ62388 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
AtmQ62388 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.8■■□□□ 1.4
AtmQ62388 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
AtmQ62388 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.79■■□□□ 1.4
AtmQ62388 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.77■■□□□ 1.4
AtmQ62388 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
AtmQ62388 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
AtmQ62388 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
AtmQ62388 Gm6345-201ENSMUST00000180378 1691 ntBASIC23.77■■□□□ 1.4
AtmQ62388 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
AtmQ62388 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
AtmQ62388 Gm22567-201ENSMUST00000175542 342 ntBASIC23.75■■□□□ 1.39
AtmQ62388 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
AtmQ62388 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
AtmQ62388 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
AtmQ62388 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
AtmQ62388 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.74■■□□□ 1.39
AtmQ62388 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
AtmQ62388 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
AtmQ62388 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.72■■□□□ 1.39
AtmQ62388 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
AtmQ62388 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
AtmQ62388 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
AtmQ62388 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
AtmQ62388 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
AtmQ62388 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
AtmQ62388 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.7■■□□□ 1.38
AtmQ62388 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
AtmQ62388 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
AtmQ62388 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
AtmQ62388 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
AtmQ62388 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
AtmQ62388 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
AtmQ62388 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
AtmQ62388 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
AtmQ62388 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
AtmQ62388 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
AtmQ62388 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
AtmQ62388 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
AtmQ62388 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.65■■□□□ 1.38
AtmQ62388 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.65■■□□□ 1.38
AtmQ62388 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
AtmQ62388 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
AtmQ62388 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
AtmQ62388 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
AtmQ62388 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
AtmQ62388 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.59■■□□□ 1.37
AtmQ62388 Gm12366-201ENSMUST00000121722 873 ntBASIC23.59■■□□□ 1.37
AtmQ62388 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.59■■□□□ 1.37
AtmQ62388 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
AtmQ62388 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.59■■□□□ 1.37
AtmQ62388 Gm5786-201ENSMUST00000085368 882 ntBASIC23.59■■□□□ 1.37
AtmQ62388 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
AtmQ62388 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
AtmQ62388 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC23.56■■□□□ 1.36
AtmQ62388 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
AtmQ62388 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
AtmQ62388 Gm5812-201ENSMUST00000061073 957 ntBASIC23.55■■□□□ 1.36
AtmQ62388 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
AtmQ62388 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
AtmQ62388 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC23.55■■□□□ 1.36
AtmQ62388 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.55■■□□□ 1.36
AtmQ62388 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
AtmQ62388 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
AtmQ62388 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC23.54■■□□□ 1.36
AtmQ62388 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.53■■□□□ 1.36
AtmQ62388 Gm4799-201ENSMUST00000095396 657 ntBASIC23.53■■□□□ 1.36
AtmQ62388 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
AtmQ62388 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
AtmQ62388 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
AtmQ62388 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC23.53■■□□□ 1.36
AtmQ62388 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.52■■□□□ 1.36
AtmQ62388 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 76.8 ms