Protein–RNA interactions for Protein: Q61191

Hcfc1, Host cell factor 1, mousemouse

Known RBP Predictions only

Length 2,045 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcfc1Q61191 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Hcfc1Q61191 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.25■□□□□ 0.99
Hcfc1Q61191 Mir6538-201ENSMUST00000183713 110 ntBASIC21.25■□□□□ 0.99
Hcfc1Q61191 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Hcfc1Q61191 Gm11175-201ENSMUST00000116172 543 ntBASIC21.24■□□□□ 0.99
Hcfc1Q61191 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Hcfc1Q61191 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Hcfc1Q61191 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hcfc1Q61191 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hcfc1Q61191 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Hcfc1Q61191 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Hcfc1Q61191 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Hcfc1Q61191 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hcfc1Q61191 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC21.19■□□□□ 0.98
Hcfc1Q61191 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC21.19■□□□□ 0.98
Hcfc1Q61191 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Hcfc1Q61191 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hcfc1Q61191 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.19■□□□□ 0.98
Hcfc1Q61191 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hcfc1Q61191 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hcfc1Q61191 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC21.17■□□□□ 0.98
Hcfc1Q61191 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hcfc1Q61191 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hcfc1Q61191 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hcfc1Q61191 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Hcfc1Q61191 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC21.15■□□□□ 0.98
Hcfc1Q61191 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Hcfc1Q61191 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcfc1Q61191 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcfc1Q61191 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hcfc1Q61191 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hcfc1Q61191 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.12■□□□□ 0.97
Hcfc1Q61191 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hcfc1Q61191 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hcfc1Q61191 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hcfc1Q61191 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcfc1Q61191 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hcfc1Q61191 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hcfc1Q61191 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Hcfc1Q61191 AC167019.3-201ENSMUST00000228225 1266 ntBASIC21.08■□□□□ 0.97
Hcfc1Q61191 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC21.07■□□□□ 0.96
Hcfc1Q61191 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.07■□□□□ 0.96
Hcfc1Q61191 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Hcfc1Q61191 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hcfc1Q61191 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Hcfc1Q61191 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Hcfc1Q61191 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Hcfc1Q61191 AC131739.1-201ENSMUST00000221692 1245 ntBASIC21.05■□□□□ 0.96
Hcfc1Q61191 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC21.04■□□□□ 0.96
Hcfc1Q61191 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Hcfc1Q61191 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hcfc1Q61191 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Hcfc1Q61191 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Hcfc1Q61191 Cap2-205ENSMUST00000225824 1634 ntBASIC21.02■□□□□ 0.95
Hcfc1Q61191 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Hcfc1Q61191 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Hcfc1Q61191 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Hcfc1Q61191 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Hcfc1Q61191 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Hcfc1Q61191 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcfc1Q61191 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.99■□□□□ 0.95
Hcfc1Q61191 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Hcfc1Q61191 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Hcfc1Q61191 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hcfc1Q61191 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Hcfc1Q61191 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC20.98■□□□□ 0.95
Hcfc1Q61191 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcfc1Q61191 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Hcfc1Q61191 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcfc1Q61191 Gm6311-201ENSMUST00000073790 878 ntBASIC20.95■□□□□ 0.94
Hcfc1Q61191 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.94■□□□□ 0.94
Hcfc1Q61191 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.94■□□□□ 0.94
Hcfc1Q61191 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Hcfc1Q61191 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcfc1Q61191 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcfc1Q61191 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcfc1Q61191 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.92■□□□□ 0.94
Hcfc1Q61191 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcfc1Q61191 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.9■□□□□ 0.94
Hcfc1Q61191 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hcfc1Q61191 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcfc1Q61191 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcfc1Q61191 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.9■□□□□ 0.94
Hcfc1Q61191 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcfc1Q61191 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcfc1Q61191 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hcfc1Q61191 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcfc1Q61191 Particl-201ENSMUST00000205370 1560 ntBASIC20.88■□□□□ 0.93
Hcfc1Q61191 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC20.88■□□□□ 0.93
Hcfc1Q61191 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
Hcfc1Q61191 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Hcfc1Q61191 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcfc1Q61191 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC20.86■□□□□ 0.93
Hcfc1Q61191 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Hcfc1Q61191 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1Q61191 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Hcfc1Q61191 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Hcfc1Q61191 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.84■□□□□ 0.93
Hcfc1Q61191 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Hcfc1Q61191 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms